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This page was generated on 2023-05-26 06:18:16 -0000 (Fri, 26 May 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.3.0 (2023-04-21) -- "Already Tomorrow" 4254
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for sesame on kunpeng2


To the developers/maintainers of the sesame package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/sesame.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

Package 1868/2197HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
sesame 1.19.4  (landing page)
Wanding Zhou
Snapshot Date: 2023-05-25 13:29:39 -0000 (Thu, 25 May 2023)
git_url: https://git.bioconductor.org/packages/sesame
git_branch: devel
git_last_commit: 939b6c8
git_last_commit_date: 2023-05-22 03:26:00 -0000 (Mon, 22 May 2023)
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    ERROR  skipped

Summary

Package: sesame
Version: 1.19.4
Command: /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data sesame
StartedAt: 2023-05-26 01:49:05 -0000 (Fri, 26 May 2023)
EndedAt: 2023-05-26 01:54:31 -0000 (Fri, 26 May 2023)
EllapsedTime: 325.5 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data sesame
###
##############################################################################
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* checking for file ‘sesame/DESCRIPTION’ ... OK
* preparing ‘sesame’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘KYCG.Rmd’ using rmarkdown
--- finished re-building ‘KYCG.Rmd’

--- re-building ‘QC.Rmd’ using rmarkdown
--- finished re-building ‘QC.Rmd’

--- re-building ‘inferences.Rmd’ using rmarkdown
--- finished re-building ‘inferences.Rmd’

--- re-building ‘modeling.Rmd’ using rmarkdown

Quitting from lines 100-103 [model6] (modeling.Rmd)
Error: processing vignette 'modeling.Rmd' failed with diagnostics:
attempt to set 'colnames' on an object with less than two dimensions
--- failed re-building ‘modeling.Rmd’

--- re-building ‘nonhuman.Rmd’ using rmarkdown
--- finished re-building ‘nonhuman.Rmd’

--- re-building ‘sesame.Rmd’ using rmarkdown
--- finished re-building ‘sesame.Rmd’

SUMMARY: processing the following file failed:
  ‘modeling.Rmd’

Error: Vignette re-building failed.
Execution halted