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### Running command:
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###   /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data netboost
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* checking for file ‘netboost/DESCRIPTION’ ... OK
* preparing ‘netboost’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* running ‘cleanup’
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘netboost’ ...
** using staged installation
checking for a BSD-compatible install... /usr/bin/install -c
checking whether build environment is sane... yes
checking for a thread-safe mkdir -p... /usr/bin/mkdir -p
checking for gawk... gawk
checking whether make sets $(MAKE)... yes
checking whether make supports nested variables... yes
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking whether gcc understands -c and -o together... yes
checking whether make supports the include directive... yes (GNU style)
checking dependency style of gcc... none
checking how to run the C preprocessor... gcc -E
checking build system type... aarch64-unknown-linux-gnu
checking host system type... aarch64-unknown-linux-gnu
checking for x86 cpuid  output... unknown
checking for x86-AVX xgetbv  output... unknown
checking whether C compiler accepts -Wno-deprecated... yes
checking for strip... strip
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating src/Makevars
config.status: creating src/mcupgma/clustering_util/Makefile
config.status: creating src/config.h
config.status: executing depfiles commands
** libs
using C++ compiler: ‘g++ (GCC) 10.3.1’
using C++11
g++ -std=gnu++11 -I"/home/biocbuild/R/R-4.3.0/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.0/library/RcppParallel/include' -I/usr/local/include   `/home/biocbuild/R/R-4.3.0/bin/Rscript -e "Rcpp:::CxxFlags()"`  -fPIC  -g -O2  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++11 -I"/home/biocbuild/R/R-4.3.0/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.0/library/RcppParallel/include' -I/usr/local/include   `/home/biocbuild/R/R-4.3.0/bin/Rscript -e "Rcpp:::CxxFlags()"`  -fPIC  -g -O2  -c boosting.cpp -o boosting.o
g++ -std=gnu++11 -I"/home/biocbuild/R/R-4.3.0/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.0/library/RcppParallel/include' -I/usr/local/include   `/home/biocbuild/R/R-4.3.0/bin/Rscript -e "Rcpp:::CxxFlags()"`  -fPIC  -g -O2  -c dist_tom.cpp -o dist_tom.o
g++ -std=gnu++11 -I"/home/biocbuild/R/R-4.3.0/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.0/library/RcppParallel/include' -I/usr/local/include   `/home/biocbuild/R/R-4.3.0/bin/Rscript -e "Rcpp:::CxxFlags()"`  -fPIC  -g -O2  -c tree_sort.cpp -o tree_sort.o
g++ -std=gnu++11 -shared -L/home/biocbuild/R/R-4.3.0/lib -L/usr/local/lib -o netboost.so RcppExports.o boosting.o dist_tom.o tree_sort.o -L/home/biocbuild/R/R-4.3.0/lib -lR
strip -S netboost.so
installing via 'install.libs.R' to /tmp/Rtmplks6RK/Rinst10a908542a85c4/00LOCK-netboost/00new/netboost
[1] "R_PACKAGE_SRC:  /tmp/Rtmplks6RK/Rbuild10a9086fe91690/netboost"
[1] "R_PACKAGE_DIR:  /tmp/Rtmplks6RK/Rinst10a908542a85c4/00LOCK-netboost/00new/netboost"
[1] "R_ARCH:         "
[1] "SHLIB_EXT:      .so"
[1] "INSTALL PATH:  /tmp/Rtmplks6RK/Rbuild10a9086fe91690/netboost/src/mcupgma/scripts/install_path.mk"
make: Entering directory '/tmp/Rtmplks6RK/Rbuild10a9086fe91690/netboost/src/mcupgma'
Clean build.
make: Leaving directory '/tmp/Rtmplks6RK/Rbuild10a9086fe91690/netboost/src/mcupgma'
make: Entering directory '/tmp/Rtmplks6RK/Rbuild10a9086fe91690/netboost/src/mcupgma'
==== compiling clustering_util sources using external Makefile (clustering_util/Makefile) recursively 
make -C clustering_util  -f Makefile mcupgma_install
make[1]: Entering directory '/tmp/Rtmplks6RK/Rbuild10a9086fe91690/netboost/src/mcupgma/clustering_util'
mkdir -p obj.aarch64_Linux
g++ -Wall  -Wno-deprecated -O3 -DNDEBUG -c -o obj.aarch64_Linux/HashingMergerMain.cmdline.o HashingMergerMain.cmdline.c
g++ -Wall  -Wno-deprecated -O3 -DNDEBUG  -Wall  -Wno-deprecated -O3 -DNDEBUG -c -o obj.aarch64_Linux/ClusteringUtil.o ClusteringUtil.cpp
g++ -Wall  -Wno-deprecated -O3 -DNDEBUG  -Wall  -Wno-deprecated -O3 -DNDEBUG -c -o obj.aarch64_Linux/Tree.o Tree.cpp
g++ -Wall  -Wno-deprecated -O3 -DNDEBUG   -o bin/edges2valid_clusters HashingMergerMain.cpp obj.aarch64_Linux/HashingMergerMain.cmdline.o obj.aarch64_Linux/ClusteringUtil.o obj.aarch64_Linux/Tree.o 
g++ -Wall  -Wno-deprecated -O3 -DNDEBUG -c -o obj.aarch64_Linux/EdgeCollatorMain.cmdline.o EdgeCollatorMain.cmdline.c
g++ -Wall  -Wno-deprecated -O3 -DNDEBUG  -o bin/edge_collator EdgeCollatorMain.cpp obj.aarch64_Linux/EdgeCollatorMain.cmdline.o obj.aarch64_Linux/ClusteringUtil.o obj.aarch64_Linux/Tree.o 
make[1]: Leaving directory '/tmp/Rtmplks6RK/Rbuild10a9086fe91690/netboost/src/mcupgma/clustering_util'
==== compiling  sources using external Makefile (clustering_round/Makefile) recursively 
make -C clustering_round  -f Makefile
make[1]: Entering directory '/tmp/Rtmplks6RK/Rbuild10a9086fe91690/netboost/src/mcupgma/clustering_round'
mkdir -p dep.aarch64_Linux 
test -d dep.aarch64_Linux && g++ -MM -MT 'dep.aarch64_Linux/test_heap.d  obj.aarch64_Linux/test_heap.o  obj.aarch64_Linux.debug/test_heap.o' -O3 -ftemplate-depth-64 -I./ test_heap.cpp > dep.aarch64_Linux/test_heap.d
test -d dep.aarch64_Linux && g++ -MM -MT 'dep.aarch64_Linux/HierarchicalClustering_with_unknown_edges.d  obj.aarch64_Linux/HierarchicalClustering_with_unknown_edges.o  obj.aarch64_Linux.debug/HierarchicalClustering_with_unknown_edges.o' -O3 -ftemplate-depth-64 -I./ HierarchicalClustering_with_unknown_edges.cpp > dep.aarch64_Linux/HierarchicalClustering_with_unknown_edges.d
test -d dep.aarch64_Linux && g++ -MM -MT 'dep.aarch64_Linux/HierarchicalClustering_main.d  obj.aarch64_Linux/HierarchicalClustering_main.o  obj.aarch64_Linux.debug/HierarchicalClustering_main.o' -O3 -ftemplate-depth-64 -I./ HierarchicalClustering_main.cpp > dep.aarch64_Linux/HierarchicalClustering_main.d
test -d dep.aarch64_Linux && g++ -MM -MT 'dep.aarch64_Linux/test_heap.d  obj.aarch64_Linux/test_heap.o  obj.aarch64_Linux.debug/test_heap.o' -O3 -ftemplate-depth-64 -I./ test_heap.cpp > dep.aarch64_Linux/test_heap.d
test -d dep.aarch64_Linux && g++ -MM -MT 'dep.aarch64_Linux/HierarchicalClustering_with_unknown_edges.d  obj.aarch64_Linux/HierarchicalClustering_with_unknown_edges.o  obj.aarch64_Linux.debug/HierarchicalClustering_with_unknown_edges.o' -O3 -ftemplate-depth-64 -I./ HierarchicalClustering_with_unknown_edges.cpp > dep.aarch64_Linux/HierarchicalClustering_with_unknown_edges.d
mkdir -p obj.aarch64_Linux 
g++ -O3 -ftemplate-depth-64 -I./ -c HierarchicalClustering_main.cpp -o obj.aarch64_Linux/HierarchicalClustering_main.o
In file included from HierarchicalClustering_main.cpp:96:
HierarchicalClustering_with_unknown_edges.hpp:322:218: error: default argument missing for parameter 7 of ‘tHierarchicalClustering::tHierarchicalClustering(tHierarchicalClustering::tEdges&, tHierarchicalClustering::tClusterId, tHierarchicalClustering::tDistance, tHierarchicalClustering::tDistance, RCPtrNamespace::RCPtr<tHierarchicalClustering::fAverager>, bool, tHierarchicalClustering::fIsLeftGreater)’
  322 |    tHierarchicalClustering(tEdges& edges, tClusterId singletonIdUB, tDistance lb_unknown, tDistance ub_unknown, RCPtr<fAverager> averager, bool is_allow_inexact_merges = false, tHierarchicalClustering::fIsLeftGreater isLeftGreater);
      |                                                                                                                                                                                  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~
HierarchicalClustering_with_unknown_edges.hpp:322:145: note: ...following parameter 6 which has a default argument
  322 |    tHierarchicalClustering(tEdges& edges, tClusterId singletonIdUB, tDistance lb_unknown, tDistance ub_unknown, RCPtr<fAverager> averager, bool is_allow_inexact_merges = false, tHierarchicalClustering::fIsLeftGreater isLeftGreater);
      |                                                                                                                                            ~~~~~^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
make[1]: *** [Makefile:127: obj.aarch64_Linux/HierarchicalClustering_main.o] Error 1
make[1]: Leaving directory '/tmp/Rtmplks6RK/Rbuild10a9086fe91690/netboost/src/mcupgma/clustering_round'
make: *** [Makefile:100: install_clustering] Error 2
make: Leaving directory '/tmp/Rtmplks6RK/Rbuild10a9086fe91690/netboost/src/mcupgma'
Error in eval(ei, envir) : 
**********************************************************************
Build mcupgma: make all failed
**********************************************************************
* removing ‘/tmp/Rtmplks6RK/Rinst10a908542a85c4/netboost’
      -----------------------------------
ERROR: package installation failed