Back to Build/check report for BioC 3.18:   simplified   long
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This page was generated on 2023-05-26 06:18:12 -0000 (Fri, 26 May 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.3.0 (2023-04-21) -- "Already Tomorrow" 4254
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

CHECK results for mosbi on kunpeng2


To the developers/maintainers of the mosbi package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/mosbi.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

Package 1260/2197HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
mosbi 1.7.0  (landing page)
Tim Daniel Rose
Snapshot Date: 2023-05-25 13:29:39 -0000 (Thu, 25 May 2023)
git_url: https://git.bioconductor.org/packages/mosbi
git_branch: devel
git_last_commit: 9caef39
git_last_commit_date: 2023-04-25 15:34:15 -0000 (Tue, 25 Apr 2023)
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    OK    ERROR  

Summary

Package: mosbi
Version: 1.7.0
Command: /home/biocbuild/R/R-4.3.0/bin/R CMD check --install=check:mosbi.install-out.txt --library=/home/biocbuild/R/R-4.3.0/site-library --timings mosbi_1.7.0.tar.gz
StartedAt: 2023-05-26 04:48:42 -0000 (Fri, 26 May 2023)
EndedAt: 2023-05-26 04:48:58 -0000 (Fri, 26 May 2023)
EllapsedTime: 16.1 seconds
RetCode: 1
Status:   ERROR  
CheckDir: mosbi.Rcheck
Warnings: NA

Command output

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/R/R-4.3.0/bin/R CMD check --install=check:mosbi.install-out.txt --library=/home/biocbuild/R/R-4.3.0/site-library --timings mosbi_1.7.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.18-bioc/meat/mosbi.Rcheck’
* using R version 4.3.0 (2023-04-21)
* using platform: aarch64-unknown-linux-gnu (64-bit)
* R was compiled by
    gcc (GCC) 10.3.1
    GNU Fortran (GCC) 10.3.1
* running under: openEuler 22.03 (LTS-SP1)
* using session charset: UTF-8
* checking for file ‘mosbi/DESCRIPTION’ ... OK
* this is package ‘mosbi’ version ‘1.7.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ...Warning: unable to access index for repository https://CRAN.R-project.org/src/contrib:
  download from 'https://CRAN.R-project.org/src/contrib/PACKAGES' failed
Warning: unable to access index for repository https://bioconductor.org/packages/3.17/bioc/src/contrib:
  download from 'https://bioconductor.org/packages/3.17/bioc/src/contrib/PACKAGES' failed
Warning: unable to access index for repository https://bioconductor.org/packages/3.17/data/annotation/src/contrib:
  download from 'https://bioconductor.org/packages/3.17/data/annotation/src/contrib/PACKAGES' failed
Warning: unable to access index for repository https://bioconductor.org/packages/3.17/data/experiment/src/contrib:
  download from 'https://bioconductor.org/packages/3.17/data/experiment/src/contrib/PACKAGES' failed
 OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... NOTE
Found the following hidden files and directories:
  .BBSoptions
These were most likely included in error. See section ‘Package
structure’ in the ‘Writing R Extensions’ manual.
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘mosbi’ can be installed ... OK
* used C++ compiler: ‘g++ (GCC) 10.3.1’
* checking C++ specification ... OK
  Not all R platforms support C++17
* checking installed package size ... NOTE
  installed size is 16.2Mb
  sub-directories of 1Mb or more:
    libs  15.7Mb
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... NOTE
GNU make is a SystemRequirements.
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... NONE
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ...
  ‘example-workflow.Rmd’ using ‘UTF-8’... failed to complete the test
  ‘similarity-metrics-evaluation.Rmd’ using ‘UTF-8’... failed to complete the test
 ERROR
Errors in running code in vignettes:
when running code in ‘example-workflow.Rmd’
  ...
> proc.time()
   user  system elapsed 
  0.173   0.024   0.191 

... incomplete output.  Crash?
when running code in ‘similarity-metrics-evaluation.Rmd’
  ...
> proc.time()
   user  system elapsed 
  0.181   0.015   0.192 

... incomplete output.  Crash?

* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... WARNING
LaTeX errors when creating PDF version.
This typically indicates Rd problems.
LaTeX errors found:
* checking PDF version of manual without index ... ERROR
* DONE

Status: 2 ERRORs, 1 WARNING, 3 NOTEs
See
  ‘/home/biocbuild/bbs-3.18-bioc/meat/mosbi.Rcheck/00check.log’
for details.

Installation output

mosbi.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R-4.3.0/bin/R CMD INSTALL mosbi
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/R/R-4.3.0/site-library’
* installing *source* package ‘mosbi’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (GCC) 10.3.1’
using C++17
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.3.0/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.0/library/BH/include' -I'/home/biocbuild/R/R-4.3.0/library/RcppParallel/include' -I/usr/local/include    -fPIC  -g -O2  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.3.0/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.0/library/BH/include' -I'/home/biocbuild/R/R-4.3.0/library/RcppParallel/include' -I/usr/local/include    -fPIC  -g -O2  -c attr_graph.cpp -o attr_graph.o
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.3.0/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.0/library/BH/include' -I'/home/biocbuild/R/R-4.3.0/library/RcppParallel/include' -I/usr/local/include    -fPIC  -g -O2  -c attributeConnector.cpp -o attributeConnector.o
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.3.0/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.0/library/BH/include' -I'/home/biocbuild/R/R-4.3.0/library/RcppParallel/include' -I/usr/local/include    -fPIC  -g -O2  -c attribute_overlap.cpp -o attribute_overlap.o
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.3.0/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.0/library/BH/include' -I'/home/biocbuild/R/R-4.3.0/library/RcppParallel/include' -I/usr/local/include    -fPIC  -g -O2  -c bicluster_methods.cpp -o bicluster_methods.o
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.3.0/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.0/library/BH/include' -I'/home/biocbuild/R/R-4.3.0/library/RcppParallel/include' -I/usr/local/include    -fPIC  -g -O2  -c boost_graph.cpp -o boost_graph.o
In file included from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/scoped_ptr.hpp:13,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:22,
                 from boost_graph.cpp:2:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/smart_ptr/scoped_ptr.hpp:74:31: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
   74 |     explicit scoped_ptr( std::auto_ptr<T> p ) BOOST_SP_NOEXCEPT : px( p.release() )
      |                               ^~~~~~~~
In file included from /usr/include/c++/10.3.1/memory:83,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/container_hash/hash.hpp:47,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/functional/hash.hpp:6,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered/unordered_set.hpp:19,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered_set.hpp:17,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:20,
                 from boost_graph.cpp:2:
/usr/include/c++/10.3.1/bits/unique_ptr.h:57:28: note: declared here
   57 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/smart_ptr/shared_ptr.hpp:17,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/vector_property_map.hpp:14,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/property_map.hpp:598,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:27,
                 from boost_graph.cpp:2:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/smart_ptr/detail/shared_count.hpp:361:33: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
  361 |     explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
      |                                 ^~~~~~~~
In file included from /usr/include/c++/10.3.1/memory:83,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/container_hash/hash.hpp:47,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/functional/hash.hpp:6,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered/unordered_set.hpp:19,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered_set.hpp:17,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:20,
                 from boost_graph.cpp:2:
/usr/include/c++/10.3.1/bits/unique_ptr.h:57:28: note: declared here
   57 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/vector_property_map.hpp:14,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/property_map.hpp:598,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:27,
                 from boost_graph.cpp:2:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/smart_ptr/shared_ptr.hpp:250:65: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
  250 | template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
      |                                                                 ^~~~~~~~
In file included from /usr/include/c++/10.3.1/memory:83,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/container_hash/hash.hpp:47,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/functional/hash.hpp:6,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered/unordered_set.hpp:19,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered_set.hpp:17,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:20,
                 from boost_graph.cpp:2:
/usr/include/c++/10.3.1/bits/unique_ptr.h:57:28: note: declared here
   57 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/vector_property_map.hpp:14,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/property_map.hpp:598,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:27,
                 from boost_graph.cpp:2:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/smart_ptr/shared_ptr.hpp:507:31: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
  507 |     explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
      |                               ^~~~~~~~
In file included from /usr/include/c++/10.3.1/memory:83,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/container_hash/hash.hpp:47,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/functional/hash.hpp:6,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered/unordered_set.hpp:19,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered_set.hpp:17,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:20,
                 from boost_graph.cpp:2:
/usr/include/c++/10.3.1/bits/unique_ptr.h:57:28: note: declared here
   57 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/vector_property_map.hpp:14,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/property_map.hpp:598,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:27,
                 from boost_graph.cpp:2:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/smart_ptr/shared_ptr.hpp:520:22: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
  520 |     shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
      |                      ^~~~~~~~
In file included from /usr/include/c++/10.3.1/memory:83,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/container_hash/hash.hpp:47,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/functional/hash.hpp:6,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered/unordered_set.hpp:19,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered_set.hpp:17,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:20,
                 from boost_graph.cpp:2:
/usr/include/c++/10.3.1/bits/unique_ptr.h:57:28: note: declared here
   57 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/vector_property_map.hpp:14,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/property_map.hpp:598,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:27,
                 from boost_graph.cpp:2:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/smart_ptr/shared_ptr.hpp:603:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
  603 |     shared_ptr & operator=( std::auto_ptr<Y> & r )
      |                                  ^~~~~~~~
In file included from /usr/include/c++/10.3.1/memory:83,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/container_hash/hash.hpp:47,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/functional/hash.hpp:6,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered/unordered_set.hpp:19,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered_set.hpp:17,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:20,
                 from boost_graph.cpp:2:
/usr/include/c++/10.3.1/bits/unique_ptr.h:57:28: note: declared here
   57 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/vector_property_map.hpp:14,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/property_map.hpp:598,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:27,
                 from boost_graph.cpp:2:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/smart_ptr/shared_ptr.hpp:612:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
  612 |     shared_ptr & operator=( std::auto_ptr<Y> && r )
      |                                  ^~~~~~~~
In file included from /usr/include/c++/10.3.1/memory:83,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/container_hash/hash.hpp:47,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/functional/hash.hpp:6,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered/unordered_set.hpp:19,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered_set.hpp:17,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:20,
                 from boost_graph.cpp:2:
/usr/include/c++/10.3.1/bits/unique_ptr.h:57:28: note: declared here
   57 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/vector_property_map.hpp:14,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/property_map.hpp:598,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:27,
                 from boost_graph.cpp:2:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function ‘boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)’:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/smart_ptr/shared_ptr.hpp:614:38: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
  614 |         this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
      |                                      ^~~~~~~~
In file included from /usr/include/c++/10.3.1/memory:83,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/container_hash/hash.hpp:47,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/functional/hash.hpp:6,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered/unordered_set.hpp:19,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered_set.hpp:17,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:20,
                 from boost_graph.cpp:2:
/usr/include/c++/10.3.1/bits/unique_ptr.h:57:28: note: declared here
   57 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/bind/mem_fn.hpp:25,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/mem_fn.hpp:22,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/function/detail/prologue.hpp:18,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/function/function_template.hpp:13,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/function/detail/maybe_include.hpp:36,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/function/function3.hpp:11,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/dynamic_property_map.hpp:25,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/graphviz.hpp:25,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/graphml.hpp:20,
                 from boost_graph.cpp:3:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/get_pointer.hpp: At global scope:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
   48 | template<class T> T * get_pointer(std::auto_ptr<T> const& p)
      |                                        ^~~~~~~~
In file included from /usr/include/c++/10.3.1/memory:83,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/container_hash/hash.hpp:47,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/functional/hash.hpp:6,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered/unordered_set.hpp:19,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered_set.hpp:17,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:20,
                 from boost_graph.cpp:2:
/usr/include/c++/10.3.1/bits/unique_ptr.h:57:28: note: declared here
   57 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.3.0/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.0/library/BH/include' -I'/home/biocbuild/R/R-4.3.0/library/RcppParallel/include' -I/usr/local/include    -fPIC  -g -O2  -c boost_write.cpp -o boost_write.o
In file included from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/scoped_ptr.hpp:13,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:22,
                 from boost_write.cpp:2:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/smart_ptr/scoped_ptr.hpp:74:31: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
   74 |     explicit scoped_ptr( std::auto_ptr<T> p ) BOOST_SP_NOEXCEPT : px( p.release() )
      |                               ^~~~~~~~
In file included from /usr/include/c++/10.3.1/memory:83,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/container_hash/hash.hpp:47,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/functional/hash.hpp:6,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered/unordered_set.hpp:19,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered_set.hpp:17,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:20,
                 from boost_write.cpp:2:
/usr/include/c++/10.3.1/bits/unique_ptr.h:57:28: note: declared here
   57 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/smart_ptr/shared_ptr.hpp:17,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/vector_property_map.hpp:14,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/property_map.hpp:598,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:27,
                 from boost_write.cpp:2:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/smart_ptr/detail/shared_count.hpp:361:33: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
  361 |     explicit shared_count( std::auto_ptr<Y> & r ): pi_( new sp_counted_impl_p<Y>( r.get() ) )
      |                                 ^~~~~~~~
In file included from /usr/include/c++/10.3.1/memory:83,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/container_hash/hash.hpp:47,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/functional/hash.hpp:6,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered/unordered_set.hpp:19,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered_set.hpp:17,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:20,
                 from boost_write.cpp:2:
/usr/include/c++/10.3.1/bits/unique_ptr.h:57:28: note: declared here
   57 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/vector_property_map.hpp:14,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/property_map.hpp:598,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:27,
                 from boost_write.cpp:2:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/smart_ptr/shared_ptr.hpp:250:65: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
  250 | template< class T, class R > struct sp_enable_if_auto_ptr< std::auto_ptr< T >, R >
      |                                                                 ^~~~~~~~
In file included from /usr/include/c++/10.3.1/memory:83,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/container_hash/hash.hpp:47,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/functional/hash.hpp:6,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered/unordered_set.hpp:19,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered_set.hpp:17,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:20,
                 from boost_write.cpp:2:
/usr/include/c++/10.3.1/bits/unique_ptr.h:57:28: note: declared here
   57 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/vector_property_map.hpp:14,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/property_map.hpp:598,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:27,
                 from boost_write.cpp:2:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/smart_ptr/shared_ptr.hpp:507:31: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
  507 |     explicit shared_ptr( std::auto_ptr<Y> & r ): px(r.get()), pn()
      |                               ^~~~~~~~
In file included from /usr/include/c++/10.3.1/memory:83,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/container_hash/hash.hpp:47,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/functional/hash.hpp:6,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered/unordered_set.hpp:19,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered_set.hpp:17,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:20,
                 from boost_write.cpp:2:
/usr/include/c++/10.3.1/bits/unique_ptr.h:57:28: note: declared here
   57 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/vector_property_map.hpp:14,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/property_map.hpp:598,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:27,
                 from boost_write.cpp:2:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/smart_ptr/shared_ptr.hpp:520:22: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
  520 |     shared_ptr( std::auto_ptr<Y> && r ): px(r.get()), pn()
      |                      ^~~~~~~~
In file included from /usr/include/c++/10.3.1/memory:83,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/container_hash/hash.hpp:47,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/functional/hash.hpp:6,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered/unordered_set.hpp:19,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered_set.hpp:17,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:20,
                 from boost_write.cpp:2:
/usr/include/c++/10.3.1/bits/unique_ptr.h:57:28: note: declared here
   57 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/vector_property_map.hpp:14,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/property_map.hpp:598,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:27,
                 from boost_write.cpp:2:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/smart_ptr/shared_ptr.hpp:603:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
  603 |     shared_ptr & operator=( std::auto_ptr<Y> & r )
      |                                  ^~~~~~~~
In file included from /usr/include/c++/10.3.1/memory:83,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/container_hash/hash.hpp:47,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/functional/hash.hpp:6,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered/unordered_set.hpp:19,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered_set.hpp:17,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:20,
                 from boost_write.cpp:2:
/usr/include/c++/10.3.1/bits/unique_ptr.h:57:28: note: declared here
   57 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/vector_property_map.hpp:14,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/property_map.hpp:598,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:27,
                 from boost_write.cpp:2:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/smart_ptr/shared_ptr.hpp:612:34: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
  612 |     shared_ptr & operator=( std::auto_ptr<Y> && r )
      |                                  ^~~~~~~~
In file included from /usr/include/c++/10.3.1/memory:83,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/container_hash/hash.hpp:47,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/functional/hash.hpp:6,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered/unordered_set.hpp:19,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered_set.hpp:17,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:20,
                 from boost_write.cpp:2:
/usr/include/c++/10.3.1/bits/unique_ptr.h:57:28: note: declared here
   57 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/vector_property_map.hpp:14,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/property_map.hpp:598,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:27,
                 from boost_write.cpp:2:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/smart_ptr/shared_ptr.hpp: In member function ‘boost::shared_ptr<T>& boost::shared_ptr<T>::operator=(std::auto_ptr<_Up>&&)’:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/smart_ptr/shared_ptr.hpp:614:38: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
  614 |         this_type( static_cast< std::auto_ptr<Y> && >( r ) ).swap( *this );
      |                                      ^~~~~~~~
In file included from /usr/include/c++/10.3.1/memory:83,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/container_hash/hash.hpp:47,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/functional/hash.hpp:6,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered/unordered_set.hpp:19,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered_set.hpp:17,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:20,
                 from boost_write.cpp:2:
/usr/include/c++/10.3.1/bits/unique_ptr.h:57:28: note: declared here
   57 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
In file included from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/bind/mem_fn.hpp:25,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/mem_fn.hpp:22,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/function/detail/prologue.hpp:18,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/function/function_template.hpp:13,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/function/detail/maybe_include.hpp:36,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/function/function3.hpp:11,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/property_map/dynamic_property_map.hpp:25,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/graphviz.hpp:25,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/graphml.hpp:20,
                 from boost_write.cpp:3:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/get_pointer.hpp: At global scope:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
   48 | template<class T> T * get_pointer(std::auto_ptr<T> const& p)
      |                                        ^~~~~~~~
In file included from /usr/include/c++/10.3.1/memory:83,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/container_hash/hash.hpp:47,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/functional/hash.hpp:6,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered/unordered_set.hpp:19,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/unordered_set.hpp:17,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/graph/adjacency_list.hpp:20,
                 from boost_write.cpp:2:
/usr/include/c++/10.3.1/bits/unique_ptr.h:57:28: note: declared here
   57 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.3.0/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.0/library/BH/include' -I'/home/biocbuild/R/R-4.3.0/library/RcppParallel/include' -I/usr/local/include    -fPIC  -g -O2  -c distance_matrix.cpp -o distance_matrix.o
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.3.0/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.0/library/BH/include' -I'/home/biocbuild/R/R-4.3.0/library/RcppParallel/include' -I/usr/local/include    -fPIC  -g -O2  -c extractBF.cpp -o extractBF.o
In file included from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/bind/mem_fn.hpp:25,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/mem_fn.hpp:22,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/function/detail/prologue.hpp:18,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/function.hpp:30,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/algorithm/string/iter_find.hpp:27,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/algorithm/string/split.hpp:16,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/algorithm/string.hpp:23,
                 from extractBF.cpp:3:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
   48 | template<class T> T * get_pointer(std::auto_ptr<T> const& p)
      |                                        ^~~~~~~~
In file included from /usr/include/c++/10.3.1/bits/locale_conv.h:41,
                 from /usr/include/c++/10.3.1/locale:43,
                 from /usr/include/c++/10.3.1/iomanip:43,
                 from /home/biocbuild/R/R-4.3.0/site-library/Rcpp/include/RcppCommon.h:53,
                 from /home/biocbuild/R/R-4.3.0/site-library/Rcpp/include/Rcpp.h:27,
                 from extractBF.cpp:2:
/usr/include/c++/10.3.1/bits/unique_ptr.h:57:28: note: declared here
   57 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.3.0/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.0/library/BH/include' -I'/home/biocbuild/R/R-4.3.0/library/RcppParallel/include' -I/usr/local/include    -fPIC  -g -O2  -c extractQUBIC2.cpp -o extractQUBIC2.o
In file included from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/bind/mem_fn.hpp:25,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/mem_fn.hpp:22,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/function/detail/prologue.hpp:18,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/function.hpp:30,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/algorithm/string/detail/find_iterator.hpp:18,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/algorithm/string/find_iterator.hpp:24,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/algorithm/string/iter_find.hpp:27,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/algorithm/string/split.hpp:16,
                 from /home/biocbuild/R/R-4.3.0/library/BH/include/boost/algorithm/string.hpp:23,
                 from extractQUBIC2.cpp:7:
/home/biocbuild/R/R-4.3.0/library/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template<class> class std::auto_ptr’ is deprecated [-Wdeprecated-declarations]
   48 | template<class T> T * get_pointer(std::auto_ptr<T> const& p)
      |                                        ^~~~~~~~
In file included from /usr/include/c++/10.3.1/bits/locale_conv.h:41,
                 from /usr/include/c++/10.3.1/locale:43,
                 from /usr/include/c++/10.3.1/iomanip:43,
                 from /home/biocbuild/R/R-4.3.0/site-library/Rcpp/include/RcppCommon.h:53,
                 from /home/biocbuild/R/R-4.3.0/site-library/Rcpp/include/Rcpp.h:27,
                 from extractQUBIC2.cpp:2:
/usr/include/c++/10.3.1/bits/unique_ptr.h:57:28: note: declared here
   57 |   template<typename> class auto_ptr;
      |                            ^~~~~~~~
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.3.0/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.0/library/BH/include' -I'/home/biocbuild/R/R-4.3.0/library/RcppParallel/include' -I/usr/local/include    -fPIC  -g -O2  -c full_graph.cpp -o full_graph.o
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.3.0/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.0/library/BH/include' -I'/home/biocbuild/R/R-4.3.0/library/RcppParallel/include' -I/usr/local/include    -fPIC  -g -O2  -c misc.cpp -o misc.o
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.3.0/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.0/library/BH/include' -I'/home/biocbuild/R/R-4.3.0/library/RcppParallel/include' -I/usr/local/include    -fPIC  -g -O2  -c network_edge_strength.cpp -o network_edge_strength.o
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.3.0/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.0/library/BH/include' -I'/home/biocbuild/R/R-4.3.0/library/RcppParallel/include' -I/usr/local/include    -fPIC  -g -O2  -c sample_biclusters.cpp -o sample_biclusters.o
g++ -std=gnu++17 -I"/home/biocbuild/R/R-4.3.0/include" -DNDEBUG  -I'/home/biocbuild/R/R-4.3.0/site-library/Rcpp/include' -I'/home/biocbuild/R/R-4.3.0/library/BH/include' -I'/home/biocbuild/R/R-4.3.0/library/RcppParallel/include' -I/usr/local/include    -fPIC  -g -O2  -c write_matrix.cpp -o write_matrix.o
g++ -std=gnu++17 -shared -L/home/biocbuild/R/R-4.3.0/lib -L/usr/local/lib -o mosbi.so RcppExports.o attr_graph.o attributeConnector.o attribute_overlap.o bicluster_methods.o boost_graph.o boost_write.o distance_matrix.o extractBF.o extractQUBIC2.o full_graph.o misc.o network_edge_strength.o sample_biclusters.o write_matrix.o -L/home/biocbuild/R/R-4.3.0/lib -lR
installing to /home/biocbuild/R/R-4.3.0/site-library/00LOCK-mosbi/00new/mosbi/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (mosbi)

Tests output

Example timings