This page was generated on 2023-05-26 06:18:09 -0000 (Fri, 26 May 2023).
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### Running command:
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### /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data goProfiles
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* checking for file ‘goProfiles/DESCRIPTION’ ... OK
* preparing ‘goProfiles’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘goProfiles.Rnw’ using Sweave
Loading required package: goProfiles
Loading required package: Biobase
Loading required package: BiocGenerics
Attaching package: ‘BiocGenerics’
The following objects are masked from ‘package:stats’:
IQR, mad, sd, var, xtabs
The following objects are masked from ‘package:base’:
Filter, Find, Map, Position, Reduce,
anyDuplicated, aperm, append, as.data.frame,
basename, cbind, colnames, dirname, do.call,
duplicated, eval, evalq, get, grep, grepl,
intersect, is.unsorted, lapply, mapply, match,
mget, order, paste, pmax, pmax.int, pmin,
pmin.int, rank, rbind, rownames, sapply, setdiff,
sort, table, tapply, union, unique, unsplit,
which.max, which.min
Welcome to Bioconductor
Vignettes contain introductory material; view
with 'browseVignettes()'. To cite Bioconductor,
see 'citation("Biobase")', and for packages
'citation("pkgname")'.
Loading required package: AnnotationDbi
Loading required package: stats4
Loading required package: IRanges
Loading required package: S4Vectors
Attaching package: ‘S4Vectors’
The following object is masked from ‘package:utils’:
findMatches
The following objects are masked from ‘package:base’:
I, expand.grid, unname
Loading required package: GO.db
Loading required package: CompQuadForm
Loading required package: stringr
Error: processing vignette 'goProfiles.Rnw' failed with diagnostics:
unable to run pdflatex on 'goProfiles.tex'
LaTeX errors:
! LaTeX Error: File `a4wide.sty' not found.
Type X to quit or <RETURN> to proceed,
or enter new name. (Default extension: sty)
! Emergency stop.
<read *>
l.20 \usepackage
{hyperref}^^M
! ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘goProfiles.Rnw’
SUMMARY: processing the following file failed:
‘goProfiles.Rnw’
Error: Vignette re-building failed.
Execution halted