Build/check report for BioC 3.18 - BUILD results for edgeR on kunpeng2

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This page was generated on 2023-05-26 06:18:07 -0000 (Fri, 26 May 2023).

Hostname	OS	Arch (*)	R version	Installed pkgs
kunpeng2	Linux (openEuler 22.03 LTS-SP1)	aarch64	4.3.0 (2023-04-21) -- "Already Tomorrow"	4254
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for edgeR on kunpeng2

To the developers/maintainers of the edgeR package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/edgeR.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

edgeR 3.43.2 (landing page)
Yunshun Chen , Gordon Smyth , Aaron Lun , Mark Robinson

Snapshot Date: 2023-05-25 13:29:39 -0000 (Thu, 25 May 2023)

git_url: https://git.bioconductor.org/packages/edgeR

git_branch: devel

git_last_commit: 05723ef

git_last_commit_date: 2023-05-21 01:48:41 -0000 (Sun, 21 May 2023)

kunpeng2

Linux (openEuler 22.03 LTS-SP1) / aarch64

ERROR

Summary

Package: edgeR

Version: 3.43.2

Command: /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data edgeR

StartedAt: 2023-05-25 22:06:24 -0000 (Thu, 25 May 2023)

EndedAt: 2023-05-25 22:09:19 -0000 (Thu, 25 May 2023)

EllapsedTime: 175.3 seconds

RetCode: 0

Status: OK

PackageFile: edgeR_3.43.2.tar.gz

PackageFileSize: 1.788 MiB

Command output

##############################################################################
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### Running command:
###
###   /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data edgeR
###
##############################################################################
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* checking for file ‘edgeR/DESCRIPTION’ ... OK
* preparing ‘edgeR’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... OK
* cleaning src
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* building ‘edgeR_3.43.2.tar.gz’