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### Running command:
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###   /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data annotate
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* checking for file ‘annotate/DESCRIPTION’ ... OK
* preparing ‘annotate’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘GOusage.Rnw’ using Sweave
Loading required package: BiocGenerics

Attaching package: ‘BiocGenerics’

The following objects are masked from ‘package:stats’:

    IQR, mad, sd, var, xtabs

The following objects are masked from ‘package:base’:

    Filter, Find, Map, Position, Reduce, anyDuplicated, aperm, append,
    as.data.frame, basename, cbind, colnames, dirname, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
    lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
    pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
    tapply, union, unique, unsplit, which.max, which.min

Welcome to Bioconductor

    Vignettes contain introductory material; view with
    'browseVignettes()'. To cite Bioconductor, see
    'citation("Biobase")', and for packages 'citation("pkgname")'.

Loading required package: AnnotationDbi
Loading required package: stats4
Loading required package: IRanges
Loading required package: S4Vectors

Attaching package: ‘S4Vectors’

The following object is masked from ‘package:utils’:

    findMatches

The following objects are masked from ‘package:base’:

    I, expand.grid, unname

Loading required package: XML

Attaching package: ‘graph’

The following object is masked from ‘package:XML’:

    addNode


Attaching package: ‘Rgraphviz’

The following object is masked from ‘package:annotate’:

    toFile

The following objects are masked from ‘package:IRanges’:

    from, to

The following objects are masked from ‘package:S4Vectors’:

    from, to

Loading required package: org.Hs.eg.db



Error: processing vignette 'GOusage.Rnw' failed with diagnostics:
unable to run pdflatex on 'GOusage.tex'
LaTeX errors:
! LaTeX Error: File `comment.sty' not found.

Type X to quit or <RETURN> to proceed,
or enter new name. (Default extension: sty)

! Emergency stop.
<read *> 
         
l.18 ^^M
        
!  ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘GOusage.Rnw’

--- re-building ‘annotate.Rnw’ using Sweave
--- finished re-building ‘annotate.Rnw’

--- re-building ‘chromLoc.Rnw’ using Sweave
--- finished re-building ‘chromLoc.Rnw’

--- re-building ‘prettyOutput.Rnw’ using Sweave
--- finished re-building ‘prettyOutput.Rnw’

--- re-building ‘query.Rnw’ using Sweave
Read 4 items
Read 3298 items
--- finished re-building ‘query.Rnw’

--- re-building ‘useDataPkgs.Rnw’ using Sweave
--- finished re-building ‘useDataPkgs.Rnw’

--- re-building ‘useProbeInfo.Rnw’ using Sweave
Loading required package: org.Rn.eg.db


Loading required package: XVector
Loading required package: GenomeInfoDb

Attaching package: ‘Biostrings’

The following object is masked from ‘package:grid’:

    pattern

The following object is masked from ‘package:graph’:

    complement

The following object is masked from ‘package:base’:

    strsplit

--- finished re-building ‘useProbeInfo.Rnw’

SUMMARY: processing the following file failed:
  ‘GOusage.Rnw’

Error: Vignette re-building failed.
Execution halted