Build/check report for BioC 3.18 - BUILD results for SpatialFeatureExperiment on kunpeng2

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This page was generated on 2023-05-26 06:18:16 -0000 (Fri, 26 May 2023).

Hostname	OS	Arch (*)	R version	Installed pkgs
kunpeng2	Linux (openEuler 22.03 LTS-SP1)	aarch64	4.3.0 (2023-04-21) -- "Already Tomorrow"	4254
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for SpatialFeatureExperiment on kunpeng2

To the developers/maintainers of the SpatialFeatureExperiment package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SpatialFeatureExperiment.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

SpatialFeatureExperiment 1.3.0 (landing page)
Lambda Moses

Snapshot Date: 2023-05-25 13:29:39 -0000 (Thu, 25 May 2023)

git_url: https://git.bioconductor.org/packages/SpatialFeatureExperiment

git_branch: devel

git_last_commit: 2fa13f2

git_last_commit_date: 2023-05-16 01:00:38 -0000 (Tue, 16 May 2023)

kunpeng2

Linux (openEuler 22.03 LTS-SP1) / aarch64

ERROR

skipped

Summary

Package: SpatialFeatureExperiment

Version: 1.3.0

Command: /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data SpatialFeatureExperiment

StartedAt: 2023-05-26 02:07:50 -0000 (Fri, 26 May 2023)

EndedAt: 2023-05-26 02:07:51 -0000 (Fri, 26 May 2023)

EllapsedTime: 1.0 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data SpatialFeatureExperiment
###
##############################################################################
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* checking for file ‘SpatialFeatureExperiment/DESCRIPTION’ ... OK
* preparing ‘SpatialFeatureExperiment’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
ERROR: dependencies ‘sf’, ‘spdep’ are not available for package ‘SpatialFeatureExperiment’
* removing ‘/tmp/Rtmpipoq9q/Rinst15e1323ebba674/SpatialFeatureExperiment’
      -----------------------------------
ERROR: package installation failed