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This page was generated on 2023-05-26 06:18:07 -0000 (Fri, 26 May 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.3.0 (2023-04-21) -- "Already Tomorrow" 4254
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BUILD results for EBSeq on kunpeng2


To the developers/maintainers of the EBSeq package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/EBSeq.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

Package 602/2197HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
EBSeq 1.41.0  (landing page)
Ning Leng
Snapshot Date: 2023-05-25 13:29:39 -0000 (Thu, 25 May 2023)
git_url: https://git.bioconductor.org/packages/EBSeq
git_branch: devel
git_last_commit: d59fa58
git_last_commit_date: 2023-04-25 14:27:13 -0000 (Tue, 25 Apr 2023)
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    ERROR  skipped

Summary

Package: EBSeq
Version: 1.41.0
Command: /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data EBSeq
StartedAt: 2023-05-25 22:06:04 -0000 (Thu, 25 May 2023)
EndedAt: 2023-05-25 22:07:35 -0000 (Thu, 25 May 2023)
EllapsedTime: 90.2 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data EBSeq
###
##############################################################################
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* checking for file ‘EBSeq/DESCRIPTION’ ... OK
* preparing ‘EBSeq’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘EBSeq_Vignette.Rnw’ using Sweave
Loading required package: blockmodeling
To cite package 'blockmodeling' in publications please use package
citation and (at least) one of the articles:

  Žiberna, Aleš (2007). Generalized blockmodeling of valued networks.
  Social Networks 29(1), 105-126.

  Žiberna, Aleš (2008). Direct and indirect approaches to blockmodeling
  of valued networks in terms of regular equivalence. Journal of
  Mathematical Sociology 32(1), 57–84.

  Žiberna, Aleš (2014). Blockmodeling of multilevel networks. Social
  Networks 39, 46–61. https://doi.org/10.1016/j.socnet.2014.04.002.

  Žiberna, Aleš (2022).  Generalized and Classical Blockmodeling of
  Valued Networks, R package version 1.1.4.
  Cugmas, Marjan (2022).  Generalized and Classical Blockmodeling of
  Valued Networks, R package version 1.1.4.

To see these entries in BibTeX format, use 'format(<citation>,
bibtex=TRUE)', or 'toBibtex(.)'.
Loading required package: gplots

Attaching package: ‘gplots’

The following object is masked from ‘package:stats’:

    lowess

Loading required package: testthat
iteration 1 done 

time 0.99 

iteration 2 done 

time 0.66 

iteration 3 done 

time 0.52 

iteration 4 done 

time 0.48 

iteration 5 done 

time 0.53 

iteration 1 done 

time 5.21 

iteration 2 done 

time 2.12 

iteration 3 done 

time 1.39 

iteration 4 done 

time 1.25 

iteration 5 done 

time 1.1 

iteration 1 done 

time 2.35 

iteration 2 done 

time 1.04 

iteration 3 done 

time 0.85 

iteration 4 done 

time 0.82 

iteration 5 done 

time 0.81 

iteration 1 done 

time 5.01 

iteration 2 done 

time 5.13 

iteration 3 done 

time 4.69 

iteration 4 done 

time 2.33 

iteration 5 done 

time 2.82 

No Replicate - estimate phi 0.00386 

iteration 1 done 

time 0.4 

iteration 2 done 

time 0.26 

iteration 3 done 

time 0.27 

iteration 4 done 

time 0.24 

iteration 5 done 

time 0.22 

No Replicate - estimate phi 0.01635 

iteration 1 done 

time 1.71 

iteration 2 done 

time 1.6 

iteration 3 done 

time 0.55 

iteration 4 done 

time 0.6 

iteration 5 done 

time 0.62 

No Replicate - estimate phi 0.00314 

iteration 1 done 

time 2.87 

iteration 2 done 

time 1.51 

iteration 3 done 

time 0.98 

iteration 4 done 

time 0.82 

iteration 5 done 

time 0.94 

No Replicate - estimate phi 0.0017 

iteration 1 done 

time 4.39 

iteration 2 done 

time 4.54 

iteration 3 done 

time 4.38 

iteration 4 done 

time 4.32 

iteration 5 done 

time 2.63 

Error: processing vignette 'EBSeq_Vignette.Rnw' failed with diagnostics:
unable to run pdflatex on 'EBSeq_Vignette.tex'
LaTeX errors:
! LaTeX Error: File `moreverb.sty' not found.

Type X to quit or <RETURN> to proceed,
or enter new name. (Default extension: sty)

! Emergency stop.
<read *> 
         
l.10 \usepackage
                {Sweave}^^M
!  ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘EBSeq_Vignette.Rnw’

SUMMARY: processing the following file failed:
  ‘EBSeq_Vignette.Rnw’

Error: Vignette re-building failed.
Execution halted