Back to Build/check report for BioC 3.18: simplified long |
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This page was generated on 2023-05-26 06:18:07 -0000 (Fri, 26 May 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
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kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.3.0 (2023-04-21) -- "Already Tomorrow" | 4254 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the EBSeq package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/EBSeq.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details. |
Package 602/2197 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
EBSeq 1.41.0 (landing page) Ning Leng
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | ERROR | skipped | |||||||||
Package: EBSeq |
Version: 1.41.0 |
Command: /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data EBSeq |
StartedAt: 2023-05-25 22:06:04 -0000 (Thu, 25 May 2023) |
EndedAt: 2023-05-25 22:07:35 -0000 (Thu, 25 May 2023) |
EllapsedTime: 90.2 seconds |
RetCode: 1 |
Status: ERROR |
PackageFile: None |
PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data EBSeq ### ############################################################################## ############################################################################## * checking for file ‘EBSeq/DESCRIPTION’ ... OK * preparing ‘EBSeq’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘EBSeq_Vignette.Rnw’ using Sweave Loading required package: blockmodeling To cite package 'blockmodeling' in publications please use package citation and (at least) one of the articles: Žiberna, Aleš (2007). Generalized blockmodeling of valued networks. Social Networks 29(1), 105-126. Žiberna, Aleš (2008). Direct and indirect approaches to blockmodeling of valued networks in terms of regular equivalence. Journal of Mathematical Sociology 32(1), 57–84. Žiberna, Aleš (2014). Blockmodeling of multilevel networks. Social Networks 39, 46–61. https://doi.org/10.1016/j.socnet.2014.04.002. Žiberna, Aleš (2022). Generalized and Classical Blockmodeling of Valued Networks, R package version 1.1.4. Cugmas, Marjan (2022). Generalized and Classical Blockmodeling of Valued Networks, R package version 1.1.4. To see these entries in BibTeX format, use 'format(<citation>, bibtex=TRUE)', or 'toBibtex(.)'. Loading required package: gplots Attaching package: ‘gplots’ The following object is masked from ‘package:stats’: lowess Loading required package: testthat iteration 1 done time 0.99 iteration 2 done time 0.66 iteration 3 done time 0.52 iteration 4 done time 0.48 iteration 5 done time 0.53 iteration 1 done time 5.21 iteration 2 done time 2.12 iteration 3 done time 1.39 iteration 4 done time 1.25 iteration 5 done time 1.1 iteration 1 done time 2.35 iteration 2 done time 1.04 iteration 3 done time 0.85 iteration 4 done time 0.82 iteration 5 done time 0.81 iteration 1 done time 5.01 iteration 2 done time 5.13 iteration 3 done time 4.69 iteration 4 done time 2.33 iteration 5 done time 2.82 No Replicate - estimate phi 0.00386 iteration 1 done time 0.4 iteration 2 done time 0.26 iteration 3 done time 0.27 iteration 4 done time 0.24 iteration 5 done time 0.22 No Replicate - estimate phi 0.01635 iteration 1 done time 1.71 iteration 2 done time 1.6 iteration 3 done time 0.55 iteration 4 done time 0.6 iteration 5 done time 0.62 No Replicate - estimate phi 0.00314 iteration 1 done time 2.87 iteration 2 done time 1.51 iteration 3 done time 0.98 iteration 4 done time 0.82 iteration 5 done time 0.94 No Replicate - estimate phi 0.0017 iteration 1 done time 4.39 iteration 2 done time 4.54 iteration 3 done time 4.38 iteration 4 done time 4.32 iteration 5 done time 2.63 Error: processing vignette 'EBSeq_Vignette.Rnw' failed with diagnostics: unable to run pdflatex on 'EBSeq_Vignette.tex' LaTeX errors: ! LaTeX Error: File `moreverb.sty' not found. Type X to quit or <RETURN> to proceed, or enter new name. (Default extension: sty) ! Emergency stop. <read *> l.10 \usepackage {Sweave}^^M ! ==> Fatal error occurred, no output PDF file produced! --- failed re-building ‘EBSeq_Vignette.Rnw’ SUMMARY: processing the following file failed: ‘EBSeq_Vignette.Rnw’ Error: Vignette re-building failed. Execution halted