Back to Build/check report for BioC 3.18:   simplified   long
AB[C]DEFGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2023-05-26 06:18:06 -0000 (Fri, 26 May 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.3.0 (2023-04-21) -- "Already Tomorrow" 4254
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for CNVrd2 on kunpeng2


To the developers/maintainers of the CNVrd2 package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CNVrd2.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

Package 384/2197HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CNVrd2 1.39.0  (landing page)
Hoang Tan Nguyen
Snapshot Date: 2023-05-25 13:29:39 -0000 (Thu, 25 May 2023)
git_url: https://git.bioconductor.org/packages/CNVrd2
git_branch: devel
git_last_commit: b415925
git_last_commit_date: 2023-04-25 14:29:34 -0000 (Tue, 25 Apr 2023)
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    ERROR  skipped

Summary

Package: CNVrd2
Version: 1.39.0
Command: /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data CNVrd2
StartedAt: 2023-05-25 21:24:55 -0000 (Thu, 25 May 2023)
EndedAt: 2023-05-25 21:26:34 -0000 (Thu, 25 May 2023)
EllapsedTime: 99.2 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data CNVrd2
###
##############################################################################
##############################################################################


* checking for file ‘CNVrd2/DESCRIPTION’ ... OK
* preparing ‘CNVrd2’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘CNVrd2.Rnw’ using knitr
[W::bcf_hdr_check_sanity] GL should be declared as Number=G
Error: processing vignette 'CNVrd2.Rnw' failed with diagnostics:
unable to run pdflatex on 'CNVrd2.tex'
LaTeX errors:
! LaTeX Error: File `a4wide.sty' not found.

Type X to quit or <RETURN> to proceed,
or enter new name. (Default extension: sty)

! Emergency stop.
<read *> 
         
l.54 \usepackage
                {hyperref}^^M
!  ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘CNVrd2.Rnw’

SUMMARY: processing the following file failed:
  ‘CNVrd2.Rnw’

Error: Vignette re-building failed.
Execution halted