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This page was generated on 2023-06-06 11:00:38 -0000 (Tue, 06 Jun 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.3.0 (2023-04-21) -- "Already Tomorrow" 4366
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for podkat on kunpeng2


To the developers/maintainers of the podkat package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/podkat.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

Package 1517/2199HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
podkat 1.33.0  (landing page)
Ulrich Bodenhofer
Snapshot Date: 2023-06-05 06:35:06 -0000 (Mon, 05 Jun 2023)
git_url: https://git.bioconductor.org/packages/podkat
git_branch: devel
git_last_commit: b553e0c
git_last_commit_date: 2023-04-25 14:38:38 -0000 (Tue, 25 Apr 2023)
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    ERROR  skipped

Summary

Package: podkat
Version: 1.33.0
Command: /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data podkat
StartedAt: 2023-06-05 13:54:58 -0000 (Mon, 05 Jun 2023)
EndedAt: 2023-06-05 13:59:29 -0000 (Mon, 05 Jun 2023)
EllapsedTime: 270.5 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data podkat
###
##############################################################################
##############################################################################


* checking for file ‘podkat/DESCRIPTION’ ... OK
* preparing ‘podkat’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘podkat.Rnw’ using knitr
Error: processing vignette 'podkat.Rnw' failed with diagnostics:
Running 'texi2dvi' on 'podkat.tex' failed.
LaTeX errors:
! Font OT1/cmtt/bx/n/10=cmttb10 at 10.0pt not loadable: Metric (TFM) file not f
ound.
<to be read again> 
                   relax 
l.1055 \bf Chromosome & \ttbf
! Emergency stop.
<to be read again> 
                   relax 
l.1055 \bf Chromosome & \ttbf
                              hg*Unmasked &
!  ==> Fatal error occurred, no output PDF file produced!
--- failed re-building ‘podkat.Rnw’

SUMMARY: processing the following file failed:
  ‘podkat.Rnw’

Error: Vignette re-building failed.
Execution halted