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This page was generated on 2023-06-06 11:00:37 -0000 (Tue, 06 Jun 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.3.0 (2023-04-21) -- "Already Tomorrow" 4366
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for octad on kunpeng2


To the developers/maintainers of the octad package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/octad.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

Package 1385/2199HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
octad 1.3.0  (landing page)
E. Chekalin
Snapshot Date: 2023-06-05 06:35:06 -0000 (Mon, 05 Jun 2023)
git_url: https://git.bioconductor.org/packages/octad
git_branch: devel
git_last_commit: fe2cbc2
git_last_commit_date: 2023-04-25 15:41:23 -0000 (Tue, 25 Apr 2023)
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    ERROR  skipped

Summary

Package: octad
Version: 1.3.0
Command: /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data octad
StartedAt: 2023-06-05 13:30:49 -0000 (Mon, 05 Jun 2023)
EndedAt: 2023-06-05 13:40:22 -0000 (Mon, 05 Jun 2023)
EllapsedTime: 573.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data octad
###
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* checking for file ‘octad/DESCRIPTION’ ... OK
* preparing ‘octad’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘octad.Rmd’ using rmarkdown

Quitting from lines 94-97 [unnamed-chunk-7] (octad.Rmd)
Error: processing vignette 'octad.Rmd' failed with diagnostics:
error in evaluating the argument 'x' in selecting a method for function 'as.matrix': no method for coercing this S4 class to a vector
--- failed re-building ‘octad.Rmd’

SUMMARY: processing the following file failed:
  ‘octad.Rmd’

Error: Vignette re-building failed.
Execution halted