Build/check report for BioC 3.18 - BUILD results for netbiov on kunpeng2

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This page was generated on 2023-06-06 11:00:37 -0000 (Tue, 06 Jun 2023).

Hostname	OS	Arch (*)	R version	Installed pkgs
kunpeng2	Linux (openEuler 22.03 LTS-SP1)	aarch64	4.3.0 (2023-04-21) -- "Already Tomorrow"	4366
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for netbiov on kunpeng2

To the developers/maintainers of the netbiov package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/netbiov.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

netbiov 1.35.0 (landing page)
Shailesh tripathi

Snapshot Date: 2023-06-05 06:35:06 -0000 (Mon, 05 Jun 2023)

git_url: https://git.bioconductor.org/packages/netbiov

git_branch: devel

git_last_commit: 4e4c86f

git_last_commit_date: 2023-04-25 14:33:16 -0000 (Tue, 25 Apr 2023)

kunpeng2

Linux (openEuler 22.03 LTS-SP1) / aarch64

ERROR

skipped

Summary

Package: netbiov

Version: 1.35.0

Command: /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data netbiov

StartedAt: 2023-06-05 13:23:52 -0000 (Mon, 05 Jun 2023)

EndedAt: 2023-06-05 13:24:04 -0000 (Mon, 05 Jun 2023)

EllapsedTime: 12.0 seconds

RetCode: 1

Status: ERROR

PackageFile: None

PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data netbiov
###
##############################################################################
##############################################################################


* checking for file ‘netbiov/DESCRIPTION’ ... OK
* preparing ‘netbiov’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘netbiov-intro.Rnw’ using Sweave
Loading required package: igraph

Attaching package: ‘igraph’

The following objects are masked from ‘package:stats’:

    decompose, spectrum

The following object is masked from ‘package:base’:

    union

munmap_chunk(): invalid pointer