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This page was generated on 2023-06-06 11:00:35 -0000 (Tue, 06 Jun 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
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kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.3.0 (2023-04-21) -- "Already Tomorrow" | 4366 |
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To the developers/maintainers of the metahdep package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/metahdep.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details. |
Package 1164/2199 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
metahdep 1.59.0 (landing page) John R. Stevens
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | WARNINGS | |||||||||
Package: metahdep |
Version: 1.59.0 |
Command: /home/biocbuild/R/R-4.3.0/bin/R CMD INSTALL metahdep |
StartedAt: 2023-06-05 08:09:23 -0000 (Mon, 05 Jun 2023) |
EndedAt: 2023-06-05 08:09:33 -0000 (Mon, 05 Jun 2023) |
EllapsedTime: 10.3 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R-4.3.0/bin/R CMD INSTALL metahdep ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-4.3.0/site-library’ * installing *source* package ‘metahdep’ ... ** using staged installation ** libs using C compiler: ‘gcc (GCC) 10.3.1’ gcc -I"/home/biocbuild/R/R-4.3.0/include" -DNDEBUG -I/usr/local/include -fPIC -g -O2 -c metahdep.c -o metahdep.o In file included from metahdep.c:3: metahdep.c: In function ‘get_row_indices2’: /home/biocbuild/R/R-4.3.0/include/Rinternals.h:197:17: warning: passing argument 5 of ‘metan_binary_search_unique’ makes integer from pointer without a cast [-Wint-conversion] 197 | #define CHAR(x) R_CHAR(x) | ^~~~~~~~~ | | | const char * metahdep.c:471:79: note: in expansion of macro ‘CHAR’ 471 | index = metan_binary_search_unique(name_list, sort_index, R_old_names, j, CHAR(STRING_ELT(R_old_chipsets, j)), i); | ^~~~ metahdep.c:372:103: note: expected ‘char’ but argument is of type ‘const char *’ 372 | SEXP metan_binary_search_unique(SEXP name_list, SEXP sort_index, SEXP gene_name, int gene_index, char chipset_name, int study_num) | ~~~~~^~~~~~~~~~~~ gcc -shared -L/home/biocbuild/R/R-4.3.0/lib -L/usr/local/lib -o metahdep.so metahdep.o -L/home/biocbuild/R/R-4.3.0/lib -lR installing to /home/biocbuild/R/R-4.3.0/site-library/00LOCK-metahdep/00new/metahdep/libs ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (metahdep)