Back to Build/check report for BioC 3.18: simplified long |
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This page was generated on 2023-06-06 11:00:33 -0000 (Tue, 06 Jun 2023).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.3.0 (2023-04-21) -- "Already Tomorrow" | 4366 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
To the developers/maintainers of the HPiP package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details. |
Package 937/2199 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.7.0 (landing page) Matineh Rahmatbakhsh
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | OK | |||||||||
Package: HPiP |
Version: 1.7.0 |
Command: /home/biocbuild/R/R-4.3.0/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/R/R-4.3.0/site-library --timings HPiP_1.7.0.tar.gz |
StartedAt: 2023-06-06 00:10:31 -0000 (Tue, 06 Jun 2023) |
EndedAt: 2023-06-06 00:26:32 -0000 (Tue, 06 Jun 2023) |
EllapsedTime: 961.4 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HPiP.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R-4.3.0/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/R/R-4.3.0/site-library --timings HPiP_1.7.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.18-bioc/meat/HPiP.Rcheck’ * using R version 4.3.0 (2023-04-21) * using platform: aarch64-unknown-linux-gnu (64-bit) * R was compiled by gcc (GCC) 10.3.1 GNU Fortran (GCC) 10.3.1 * running under: openEuler 22.03 (LTS-SP1) * using session charset: UTF-8 * checking for file ‘HPiP/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘HPiP’ version ‘1.7.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘HPiP’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Package unavailable to check Rd xrefs: ‘ftrCOOL’ * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed var_imp 39.933 0.717 40.755 corr_plot 38.268 0.415 38.748 FSmethod 37.730 0.455 38.248 pred_ensembel 18.076 0.294 16.057 enrichfindP 0.426 0.012 15.856 getFASTA 0.074 0.008 7.451 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘runTests.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... ‘HPiP_tutorial.Rmd’ using ‘UTF-8’... OK NONE * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 1 NOTE See ‘/home/biocbuild/bbs-3.18-bioc/meat/HPiP.Rcheck/00check.log’ for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R-4.3.0/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-4.3.0/site-library’ * installing *source* package ‘HPiP’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R version 4.3.0 (2023-04-21) -- "Already Tomorrow" Copyright (C) 2023 The R Foundation for Statistical Computing Platform: aarch64-unknown-linux-gnu (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 101.873314 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 96.874924 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 116.484083 final value 94.252921 converged Fitting Repeat 4 # weights: 103 initial value 104.946891 final value 94.466823 converged Fitting Repeat 5 # weights: 103 initial value 98.548644 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 103.429637 iter 10 value 92.001576 iter 20 value 90.085107 iter 30 value 90.077844 final value 90.077811 converged Fitting Repeat 2 # weights: 305 initial value 102.017425 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 103.487676 iter 10 value 91.034768 iter 20 value 85.999363 iter 30 value 84.435385 iter 40 value 84.429523 final value 84.429415 converged Fitting Repeat 4 # weights: 305 initial value 97.006879 final value 94.484212 converged Fitting Repeat 5 # weights: 305 initial value 95.269624 final value 94.466823 converged Fitting Repeat 1 # weights: 507 initial value 97.057565 final value 94.484211 converged Fitting Repeat 2 # weights: 507 initial value 97.599126 final value 94.484211 converged Fitting Repeat 3 # weights: 507 initial value 95.961469 iter 10 value 93.496112 iter 20 value 93.484136 final value 93.484123 converged Fitting Repeat 4 # weights: 507 initial value 124.788664 final value 94.252920 converged Fitting Repeat 5 # weights: 507 initial value 102.122426 final value 94.484211 converged Fitting Repeat 1 # weights: 103 initial value 98.545384 iter 10 value 94.233853 iter 20 value 94.040394 iter 30 value 93.394982 iter 40 value 90.054907 iter 50 value 89.203255 iter 60 value 87.344259 iter 70 value 87.090929 iter 80 value 87.031849 final value 87.031733 converged Fitting Repeat 2 # weights: 103 initial value 103.545236 iter 10 value 94.488529 iter 20 value 93.935490 iter 30 value 91.286991 iter 40 value 89.916365 iter 50 value 89.542259 iter 60 value 89.306235 iter 70 value 85.510224 iter 80 value 85.050598 iter 90 value 84.646082 final value 84.646016 converged Fitting Repeat 3 # weights: 103 initial value 96.881867 iter 10 value 94.406695 iter 20 value 88.203458 iter 30 value 85.963596 iter 40 value 85.519748 iter 50 value 85.269325 iter 60 value 84.717005 iter 70 value 84.646019 final value 84.646016 converged Fitting Repeat 4 # weights: 103 initial value 99.501462 iter 10 value 94.486436 iter 20 value 93.927018 iter 30 value 93.733266 iter 40 value 88.093362 iter 50 value 87.499146 iter 60 value 86.884407 iter 70 value 86.348265 iter 80 value 86.313150 iter 90 value 86.308457 final value 86.308445 converged Fitting Repeat 5 # weights: 103 initial value 97.689977 iter 10 value 94.452089 iter 20 value 93.859069 iter 30 value 93.729373 iter 40 value 91.996842 iter 50 value 90.079738 iter 60 value 89.627788 iter 70 value 89.409521 iter 80 value 86.538500 iter 90 value 86.322908 iter 100 value 86.308531 final value 86.308531 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 110.486181 iter 10 value 90.952345 iter 20 value 89.112802 iter 30 value 87.869995 iter 40 value 87.563366 iter 50 value 85.667270 iter 60 value 85.091589 iter 70 value 84.971554 iter 80 value 84.192274 iter 90 value 84.069117 iter 100 value 84.064568 final value 84.064568 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 101.831221 iter 10 value 94.546793 iter 20 value 94.425315 iter 30 value 94.097141 iter 40 value 90.227950 iter 50 value 86.912409 iter 60 value 86.128852 iter 70 value 84.780192 iter 80 value 84.154645 iter 90 value 84.052474 iter 100 value 83.965281 final value 83.965281 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 103.708597 iter 10 value 94.432507 iter 20 value 88.794123 iter 30 value 86.283452 iter 40 value 84.965763 iter 50 value 84.775092 iter 60 value 84.540298 iter 70 value 84.517625 final value 84.517504 converged Fitting Repeat 4 # weights: 305 initial value 109.905775 iter 10 value 94.493216 iter 20 value 87.911246 iter 30 value 86.981597 iter 40 value 86.230550 iter 50 value 85.965652 iter 60 value 85.952643 iter 70 value 85.613152 iter 80 value 84.249373 iter 90 value 84.128425 iter 100 value 84.087089 final value 84.087089 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 103.304240 iter 10 value 94.309854 iter 20 value 92.583526 iter 30 value 87.926337 iter 40 value 84.847410 iter 50 value 84.442683 iter 60 value 84.323639 iter 70 value 84.234089 iter 80 value 83.958524 iter 90 value 83.530450 iter 100 value 83.265098 final value 83.265098 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 105.609773 iter 10 value 94.713513 iter 20 value 93.554529 iter 30 value 91.199179 iter 40 value 88.833469 iter 50 value 87.988002 iter 60 value 85.260207 iter 70 value 84.814795 iter 80 value 84.500316 iter 90 value 83.690236 iter 100 value 83.278427 final value 83.278427 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 119.632214 iter 10 value 94.276562 iter 20 value 91.816405 iter 30 value 85.981396 iter 40 value 84.308574 iter 50 value 83.362788 iter 60 value 83.188245 iter 70 value 83.006530 iter 80 value 82.887623 iter 90 value 82.804972 iter 100 value 82.762184 final value 82.762184 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 134.930961 iter 10 value 94.604303 iter 20 value 94.089816 iter 30 value 91.891233 iter 40 value 85.346048 iter 50 value 84.476522 iter 60 value 84.055256 iter 70 value 83.736240 iter 80 value 83.575043 iter 90 value 83.470994 iter 100 value 83.168602 final value 83.168602 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 104.252912 iter 10 value 94.387274 iter 20 value 90.500537 iter 30 value 88.413259 iter 40 value 87.017545 iter 50 value 86.537109 iter 60 value 86.043638 iter 70 value 85.628228 iter 80 value 84.528009 iter 90 value 84.370781 iter 100 value 84.284199 final value 84.284199 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 106.706797 iter 10 value 94.527160 iter 20 value 93.581998 iter 30 value 93.326309 iter 40 value 92.146970 iter 50 value 91.572601 iter 60 value 89.176480 iter 70 value 87.379910 iter 80 value 84.826119 iter 90 value 83.787060 iter 100 value 83.394817 final value 83.394817 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 95.528867 final value 94.485975 converged Fitting Repeat 2 # weights: 103 initial value 103.368465 final value 94.485843 converged Fitting Repeat 3 # weights: 103 initial value 105.557710 final value 94.486049 converged Fitting Repeat 4 # weights: 103 initial value 95.737729 final value 94.485921 converged Fitting Repeat 5 # weights: 103 initial value 106.001633 final value 94.485962 converged Fitting Repeat 1 # weights: 305 initial value 99.067294 iter 10 value 94.489409 iter 20 value 94.484476 iter 30 value 94.264865 iter 40 value 93.881478 iter 50 value 87.074193 iter 60 value 86.736057 final value 86.736004 converged Fitting Repeat 2 # weights: 305 initial value 103.699669 iter 10 value 94.269266 iter 20 value 94.262009 iter 30 value 93.905031 iter 40 value 87.530675 final value 86.944500 converged Fitting Repeat 3 # weights: 305 initial value 115.884394 iter 10 value 94.257629 iter 20 value 94.244347 iter 30 value 93.967778 iter 40 value 93.915499 iter 50 value 93.904945 final value 93.904916 converged Fitting Repeat 4 # weights: 305 initial value 99.298202 iter 10 value 94.489156 iter 20 value 94.451026 iter 30 value 92.930905 iter 40 value 92.366738 final value 92.365244 converged Fitting Repeat 5 # weights: 305 initial value 96.449114 iter 10 value 91.514085 iter 20 value 91.340548 iter 30 value 91.217060 iter 40 value 91.212964 iter 50 value 91.193554 iter 60 value 91.178916 iter 70 value 91.175899 iter 80 value 90.946826 final value 90.877550 converged Fitting Repeat 1 # weights: 507 initial value 123.063067 iter 10 value 94.474712 iter 20 value 94.467206 iter 30 value 94.148033 iter 40 value 93.444303 iter 50 value 93.418229 iter 60 value 92.582452 iter 70 value 92.527505 iter 80 value 92.527391 final value 92.527165 converged Fitting Repeat 2 # weights: 507 initial value 100.137535 iter 10 value 94.474845 iter 20 value 94.468089 iter 30 value 94.462755 iter 40 value 89.942485 iter 50 value 89.487274 final value 89.325445 converged Fitting Repeat 3 # weights: 507 initial value 100.592256 iter 10 value 93.668740 iter 20 value 89.770402 iter 30 value 85.202141 iter 40 value 84.778253 iter 50 value 84.751507 iter 60 value 84.050144 iter 70 value 83.822445 iter 80 value 83.811645 iter 90 value 82.830902 iter 100 value 82.604113 final value 82.604113 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 98.462886 iter 10 value 94.474230 iter 20 value 94.405029 iter 30 value 92.295968 iter 40 value 92.067324 iter 50 value 91.862267 final value 91.862250 converged Fitting Repeat 5 # weights: 507 initial value 96.073761 iter 10 value 94.474670 iter 20 value 94.169222 iter 30 value 93.977196 iter 40 value 90.533093 iter 50 value 86.961385 iter 60 value 86.944278 iter 70 value 86.858479 iter 80 value 86.679317 iter 90 value 86.331884 iter 100 value 86.214214 final value 86.214214 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 103.260013 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 95.526112 final value 94.026542 converged Fitting Repeat 3 # weights: 103 initial value 105.806013 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 96.890866 iter 10 value 94.026542 iter 10 value 94.026542 iter 10 value 94.026542 final value 94.026542 converged Fitting Repeat 5 # weights: 103 initial value 98.218205 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 127.065383 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 100.861639 iter 10 value 94.499627 final value 94.484135 converged Fitting Repeat 3 # weights: 305 initial value 103.196230 iter 10 value 94.474338 final value 94.474336 converged Fitting Repeat 4 # weights: 305 initial value 108.884633 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 99.141746 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 131.104731 final value 94.484211 converged Fitting Repeat 2 # weights: 507 initial value 102.855313 final value 94.461207 converged Fitting Repeat 3 # weights: 507 initial value 114.594012 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 99.678164 final value 94.484211 converged Fitting Repeat 5 # weights: 507 initial value 103.435634 final value 94.484211 converged Fitting Repeat 1 # weights: 103 initial value 99.347229 iter 10 value 94.489066 iter 20 value 94.243106 iter 30 value 94.213388 iter 40 value 94.188069 iter 50 value 87.947838 iter 60 value 86.425139 iter 70 value 85.911287 iter 80 value 85.807005 iter 90 value 85.747443 iter 100 value 85.643484 final value 85.643484 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 96.573364 iter 10 value 94.490181 iter 20 value 93.328141 iter 30 value 86.737433 iter 40 value 84.103515 iter 50 value 83.835076 iter 60 value 83.732504 iter 70 value 83.490628 iter 80 value 83.361281 iter 90 value 83.323890 iter 100 value 83.319510 final value 83.319510 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 98.803550 iter 10 value 94.486328 iter 20 value 89.160550 iter 30 value 87.429763 iter 40 value 85.452376 iter 50 value 84.655768 iter 60 value 83.667282 iter 70 value 83.385988 iter 80 value 83.333392 iter 90 value 83.319596 final value 83.319493 converged Fitting Repeat 4 # weights: 103 initial value 96.663129 iter 10 value 94.449545 iter 20 value 94.127454 iter 30 value 94.125946 iter 40 value 93.790957 iter 50 value 87.330329 iter 60 value 86.524997 iter 70 value 86.436371 iter 80 value 86.392465 iter 90 value 86.339403 iter 100 value 84.189298 final value 84.189298 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 102.856613 iter 10 value 92.156911 iter 20 value 88.349722 iter 30 value 87.721957 iter 40 value 86.802583 iter 50 value 84.834152 iter 60 value 83.620277 iter 70 value 83.468482 iter 80 value 83.321890 iter 90 value 83.319510 final value 83.319493 converged Fitting Repeat 1 # weights: 305 initial value 99.325228 iter 10 value 94.445984 iter 20 value 89.985486 iter 30 value 88.529604 iter 40 value 86.197930 iter 50 value 82.224467 iter 60 value 81.934975 iter 70 value 81.489589 iter 80 value 81.322533 iter 90 value 80.659648 iter 100 value 80.281436 final value 80.281436 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 118.640688 iter 10 value 93.285321 iter 20 value 88.782471 iter 30 value 86.810535 iter 40 value 85.938865 iter 50 value 85.820380 iter 60 value 85.788853 iter 70 value 85.587546 iter 80 value 82.681832 iter 90 value 81.705270 iter 100 value 80.996327 final value 80.996327 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 101.500224 iter 10 value 91.525686 iter 20 value 86.762820 iter 30 value 86.197679 iter 40 value 85.903945 iter 50 value 84.832322 iter 60 value 83.712212 iter 70 value 83.299594 iter 80 value 83.193643 iter 90 value 83.042488 iter 100 value 82.933548 final value 82.933548 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 100.462654 iter 10 value 94.578551 iter 20 value 91.484183 iter 30 value 89.297354 iter 40 value 84.034763 iter 50 value 83.725841 iter 60 value 83.390202 iter 70 value 82.206792 iter 80 value 82.134774 iter 90 value 82.005280 iter 100 value 81.486417 final value 81.486417 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 99.690500 iter 10 value 94.516524 iter 20 value 88.383560 iter 30 value 84.687386 iter 40 value 83.843324 iter 50 value 83.612710 iter 60 value 83.496058 iter 70 value 83.407601 iter 80 value 83.289274 iter 90 value 83.266554 iter 100 value 82.186152 final value 82.186152 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 126.332748 iter 10 value 94.212212 iter 20 value 94.093091 iter 30 value 92.859714 iter 40 value 84.859550 iter 50 value 83.510727 iter 60 value 81.565453 iter 70 value 80.586131 iter 80 value 80.402974 iter 90 value 80.264976 iter 100 value 80.151184 final value 80.151184 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 123.999615 iter 10 value 94.621664 iter 20 value 91.606845 iter 30 value 88.497783 iter 40 value 87.675340 iter 50 value 83.200795 iter 60 value 81.927443 iter 70 value 81.424137 iter 80 value 81.214423 iter 90 value 80.889256 iter 100 value 80.802670 final value 80.802670 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 117.088808 iter 10 value 94.660584 iter 20 value 94.122746 iter 30 value 87.008399 iter 40 value 86.165144 iter 50 value 85.116275 iter 60 value 84.275236 iter 70 value 83.682135 iter 80 value 83.107184 iter 90 value 82.952728 iter 100 value 82.860564 final value 82.860564 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 104.908625 iter 10 value 94.514732 iter 20 value 93.330556 iter 30 value 87.321678 iter 40 value 84.508632 iter 50 value 84.071948 iter 60 value 82.571199 iter 70 value 81.817080 iter 80 value 81.499370 iter 90 value 81.163540 iter 100 value 80.825501 final value 80.825501 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 110.742703 iter 10 value 90.725031 iter 20 value 87.919620 iter 30 value 83.099509 iter 40 value 81.688494 iter 50 value 81.151501 iter 60 value 80.875413 iter 70 value 80.624715 iter 80 value 80.446417 iter 90 value 80.345588 iter 100 value 80.298430 final value 80.298430 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 96.223639 iter 10 value 94.486048 final value 94.485966 converged Fitting Repeat 2 # weights: 103 initial value 100.027608 final value 94.485862 converged Fitting Repeat 3 # weights: 103 initial value 99.901229 final value 94.485939 converged Fitting Repeat 4 # weights: 103 initial value 97.617481 final value 94.486111 converged Fitting Repeat 5 # weights: 103 initial value 101.227208 final value 94.485677 converged Fitting Repeat 1 # weights: 305 initial value 97.315371 iter 10 value 94.475384 iter 20 value 94.030770 iter 30 value 94.028465 iter 40 value 94.026710 iter 50 value 94.026365 final value 94.026345 converged Fitting Repeat 2 # weights: 305 initial value 133.672760 iter 10 value 94.488675 iter 20 value 94.264974 iter 30 value 94.031265 iter 40 value 94.027312 iter 50 value 93.794517 iter 60 value 89.126286 iter 70 value 88.531812 iter 80 value 88.524033 iter 90 value 88.523706 final value 88.523668 converged Fitting Repeat 3 # weights: 305 initial value 111.302048 iter 10 value 94.087672 iter 20 value 94.081951 iter 30 value 94.079895 iter 40 value 94.046129 iter 50 value 94.027908 final value 94.027882 converged Fitting Repeat 4 # weights: 305 initial value 96.347823 iter 10 value 94.488207 iter 20 value 94.484183 iter 30 value 94.278203 iter 40 value 91.854618 iter 50 value 86.495293 iter 60 value 84.408043 iter 70 value 83.872903 final value 83.812634 converged Fitting Repeat 5 # weights: 305 initial value 98.106293 iter 10 value 94.489066 iter 20 value 94.139967 final value 94.026774 converged Fitting Repeat 1 # weights: 507 initial value 98.785316 iter 10 value 94.034425 iter 20 value 94.029214 iter 30 value 93.880677 iter 40 value 89.870134 iter 50 value 85.534732 iter 60 value 81.913933 iter 70 value 81.865751 iter 80 value 81.584688 iter 90 value 81.347107 iter 100 value 81.344513 final value 81.344513 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 99.506332 iter 10 value 92.845492 iter 20 value 92.845249 iter 20 value 92.845249 final value 92.845246 converged Fitting Repeat 3 # weights: 507 initial value 94.714513 iter 10 value 85.777413 iter 20 value 84.794382 iter 30 value 84.766359 iter 40 value 84.422126 iter 50 value 84.360275 iter 60 value 84.328500 final value 84.324554 converged Fitting Repeat 4 # weights: 507 initial value 100.840918 iter 10 value 94.491764 iter 20 value 94.361981 iter 30 value 92.075577 iter 40 value 87.365692 iter 50 value 87.141520 iter 60 value 82.765973 iter 70 value 82.163614 iter 80 value 82.025069 iter 90 value 81.736341 iter 100 value 81.713540 final value 81.713540 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 96.892203 iter 10 value 94.489494 iter 20 value 94.425184 iter 30 value 94.025022 iter 40 value 87.228163 iter 50 value 86.938724 iter 60 value 85.978708 iter 70 value 83.731306 iter 80 value 83.697281 iter 90 value 83.494580 iter 100 value 82.893393 final value 82.893393 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 98.818418 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 100.698502 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 104.220112 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 105.599530 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 103.255768 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 102.540250 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 107.993040 iter 10 value 93.454489 final value 93.288889 converged Fitting Repeat 3 # weights: 305 initial value 107.856430 iter 10 value 94.008696 iter 10 value 94.008696 iter 10 value 94.008696 final value 94.008696 converged Fitting Repeat 4 # weights: 305 initial value 108.889396 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 91.794749 iter 10 value 82.048034 iter 20 value 81.844503 iter 30 value 81.830138 final value 81.829860 converged Fitting Repeat 1 # weights: 507 initial value 99.839076 final value 94.052910 converged Fitting Repeat 2 # weights: 507 initial value 104.575326 final value 94.052910 converged Fitting Repeat 3 # weights: 507 initial value 100.936577 final value 94.052910 converged Fitting Repeat 4 # weights: 507 initial value 131.458200 iter 10 value 94.052910 iter 10 value 94.052910 iter 10 value 94.052910 final value 94.052910 converged Fitting Repeat 5 # weights: 507 initial value 106.064877 final value 94.052910 converged Fitting Repeat 1 # weights: 103 initial value 104.075635 iter 10 value 93.969735 iter 20 value 93.074554 iter 30 value 85.177836 iter 40 value 80.375241 iter 50 value 79.574719 iter 60 value 79.030595 iter 70 value 78.948485 iter 80 value 78.946670 iter 80 value 78.946669 iter 80 value 78.946669 final value 78.946669 converged Fitting Repeat 2 # weights: 103 initial value 98.784256 iter 10 value 93.893389 iter 20 value 91.146818 iter 30 value 89.793145 iter 40 value 89.695469 iter 50 value 89.658739 iter 60 value 82.387262 iter 70 value 79.870917 iter 80 value 78.804009 iter 90 value 77.908737 iter 100 value 77.512651 final value 77.512651 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 96.062781 iter 10 value 93.689936 iter 20 value 86.774088 iter 30 value 80.781939 iter 40 value 78.609353 iter 50 value 78.176449 iter 60 value 77.559188 iter 70 value 77.287600 iter 80 value 77.259540 iter 90 value 77.155732 final value 77.113791 converged Fitting Repeat 4 # weights: 103 initial value 95.905320 iter 10 value 93.942202 iter 20 value 81.729947 iter 30 value 80.299390 iter 40 value 80.163315 iter 50 value 79.877103 iter 60 value 79.103467 iter 70 value 78.698020 iter 80 value 78.689009 final value 78.689004 converged Fitting Repeat 5 # weights: 103 initial value 105.466195 iter 10 value 94.014876 iter 20 value 89.387647 iter 30 value 82.595518 iter 40 value 81.800584 iter 50 value 81.484023 iter 60 value 81.362901 iter 70 value 81.353512 iter 80 value 81.343491 final value 81.343333 converged Fitting Repeat 1 # weights: 305 initial value 100.551753 iter 10 value 91.119304 iter 20 value 81.961376 iter 30 value 80.107727 iter 40 value 78.276667 iter 50 value 76.322380 iter 60 value 76.056506 iter 70 value 75.573628 iter 80 value 75.376379 iter 90 value 75.266750 iter 100 value 75.241262 final value 75.241262 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 105.975565 iter 10 value 94.180062 iter 20 value 92.898339 iter 30 value 91.000364 iter 40 value 88.849258 iter 50 value 88.649210 final value 88.571758 converged Fitting Repeat 3 # weights: 305 initial value 105.712628 iter 10 value 94.992970 iter 20 value 94.052548 iter 30 value 91.051425 iter 40 value 90.784015 iter 50 value 90.619641 iter 60 value 89.755852 iter 70 value 88.541709 iter 80 value 88.276595 iter 90 value 81.792187 iter 100 value 79.553061 final value 79.553061 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 106.098261 iter 10 value 94.928169 iter 20 value 81.286483 iter 30 value 79.165719 iter 40 value 76.843588 iter 50 value 76.283045 iter 60 value 76.038274 iter 70 value 75.725776 iter 80 value 75.690695 iter 90 value 75.660748 iter 100 value 75.624377 final value 75.624377 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 113.098150 iter 10 value 93.050364 iter 20 value 83.268068 iter 30 value 82.500991 iter 40 value 81.489294 iter 50 value 80.524900 iter 60 value 78.498029 iter 70 value 78.068222 iter 80 value 77.570510 iter 90 value 77.468093 iter 100 value 77.277266 final value 77.277266 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 121.306357 iter 10 value 94.892340 iter 20 value 87.034204 iter 30 value 79.998727 iter 40 value 78.667542 iter 50 value 76.401028 iter 60 value 75.916486 iter 70 value 75.601780 iter 80 value 75.369712 iter 90 value 75.180261 iter 100 value 75.081178 final value 75.081178 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 115.281750 iter 10 value 96.868487 iter 20 value 85.906864 iter 30 value 83.779869 iter 40 value 82.483835 iter 50 value 81.150689 iter 60 value 80.659794 iter 70 value 80.320307 iter 80 value 79.793089 iter 90 value 77.483619 iter 100 value 77.036722 final value 77.036722 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 104.349415 iter 10 value 94.059160 iter 20 value 93.278860 iter 30 value 91.926994 iter 40 value 91.706966 iter 50 value 91.347457 iter 60 value 91.146378 iter 70 value 86.744539 iter 80 value 82.420074 iter 90 value 78.789698 iter 100 value 76.942332 final value 76.942332 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 107.325041 iter 10 value 94.025532 iter 20 value 88.151140 iter 30 value 81.628042 iter 40 value 79.431942 iter 50 value 78.878490 iter 60 value 78.656592 iter 70 value 78.436359 iter 80 value 78.306183 iter 90 value 78.154363 iter 100 value 77.770661 final value 77.770661 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 121.777041 iter 10 value 99.991514 iter 20 value 91.164177 iter 30 value 85.740968 iter 40 value 81.125932 iter 50 value 79.428294 iter 60 value 78.907973 iter 70 value 78.850813 iter 80 value 78.706496 iter 90 value 78.249842 iter 100 value 77.638192 final value 77.638192 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 97.424574 final value 94.054774 converged Fitting Repeat 2 # weights: 103 initial value 98.759938 final value 94.010280 converged Fitting Repeat 3 # weights: 103 initial value 96.667778 final value 94.054375 converged Fitting Repeat 4 # weights: 103 initial value 94.414507 final value 94.054530 converged Fitting Repeat 5 # weights: 103 initial value 108.603724 iter 10 value 94.082226 iter 20 value 94.077583 final value 94.052913 converged Fitting Repeat 1 # weights: 305 initial value 105.644216 iter 10 value 94.057791 iter 20 value 94.029635 iter 30 value 89.381060 iter 40 value 89.004380 iter 50 value 88.995266 iter 60 value 88.988621 iter 70 value 88.988088 iter 70 value 88.988088 final value 88.988088 converged Fitting Repeat 2 # weights: 305 initial value 105.370636 iter 10 value 93.989446 iter 20 value 93.985607 iter 30 value 92.862338 iter 40 value 90.658502 iter 40 value 90.658502 iter 40 value 90.658502 final value 90.658502 converged Fitting Repeat 3 # weights: 305 initial value 105.466386 iter 10 value 94.058019 iter 20 value 94.052987 iter 30 value 92.496839 iter 40 value 83.990780 iter 50 value 83.889531 iter 60 value 83.888664 iter 70 value 83.886497 iter 80 value 83.885445 iter 90 value 83.885236 final value 83.884951 converged Fitting Repeat 4 # weights: 305 initial value 98.151790 iter 10 value 94.057810 iter 20 value 93.732641 iter 30 value 89.456356 final value 89.454663 converged Fitting Repeat 5 # weights: 305 initial value 96.785898 iter 10 value 94.013646 iter 20 value 94.009748 iter 30 value 91.711993 iter 40 value 91.656756 final value 91.656703 converged Fitting Repeat 1 # weights: 507 initial value 97.936324 iter 10 value 94.060072 iter 20 value 94.041961 iter 30 value 93.532863 iter 40 value 81.419832 iter 50 value 81.314532 iter 60 value 81.313561 final value 81.313430 converged Fitting Repeat 2 # weights: 507 initial value 102.380894 iter 10 value 94.061101 iter 20 value 81.843363 iter 30 value 81.606003 iter 40 value 77.484374 iter 50 value 77.458236 iter 60 value 77.304208 iter 70 value 76.554237 iter 80 value 76.467723 iter 90 value 76.439773 iter 100 value 76.347191 final value 76.347191 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 113.475228 iter 10 value 94.061690 iter 20 value 94.003676 iter 30 value 92.257451 iter 40 value 92.252674 iter 50 value 90.721203 iter 60 value 90.478557 iter 70 value 90.477590 iter 80 value 90.466204 iter 90 value 90.390988 final value 90.390630 converged Fitting Repeat 4 # weights: 507 initial value 119.528707 iter 10 value 94.061853 iter 20 value 94.015176 iter 30 value 94.011127 iter 40 value 93.933179 iter 50 value 82.307392 iter 60 value 82.165326 iter 70 value 82.064944 iter 80 value 80.867801 iter 90 value 80.858352 iter 100 value 80.214401 final value 80.214401 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 97.639987 iter 10 value 93.219528 iter 20 value 93.216595 iter 30 value 90.414645 iter 40 value 87.578674 iter 50 value 87.315663 iter 60 value 84.636035 iter 70 value 84.590121 iter 80 value 83.487605 iter 90 value 78.453477 iter 100 value 78.345964 final value 78.345964 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 95.992312 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 97.941917 final value 94.275362 converged Fitting Repeat 3 # weights: 103 initial value 112.553930 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 97.712384 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 95.649266 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 102.224021 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 96.636621 final value 94.275362 converged Fitting Repeat 3 # weights: 305 initial value 94.563362 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 102.980942 iter 10 value 81.786715 iter 20 value 81.582194 iter 30 value 81.392884 iter 40 value 81.379346 final value 81.377468 converged Fitting Repeat 5 # weights: 305 initial value 99.797847 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 108.334400 final value 94.275362 converged Fitting Repeat 2 # weights: 507 initial value 108.094945 final value 94.275363 converged Fitting Repeat 3 # weights: 507 initial value 108.180895 iter 10 value 91.903864 iter 20 value 85.394034 final value 85.393874 converged Fitting Repeat 4 # weights: 507 initial value 109.334289 iter 10 value 93.053542 iter 20 value 92.935006 iter 30 value 91.764228 iter 40 value 91.614909 final value 91.614716 converged Fitting Repeat 5 # weights: 507 initial value 103.246526 iter 10 value 94.144736 iter 20 value 93.695232 iter 30 value 93.691074 final value 93.691059 converged Fitting Repeat 1 # weights: 103 initial value 107.343265 iter 10 value 94.234691 iter 20 value 86.920171 iter 30 value 86.188561 iter 40 value 83.412303 iter 50 value 82.565038 iter 60 value 82.395260 iter 70 value 82.381699 final value 82.381424 converged Fitting Repeat 2 # weights: 103 initial value 104.739939 iter 10 value 94.347706 iter 20 value 94.329913 iter 30 value 91.763813 iter 40 value 88.265998 iter 50 value 85.853657 iter 60 value 83.832642 iter 70 value 83.321065 iter 80 value 82.591692 iter 90 value 82.382719 final value 82.382481 converged Fitting Repeat 3 # weights: 103 initial value 97.409546 iter 10 value 94.491847 iter 20 value 94.040151 iter 30 value 93.734597 iter 40 value 93.684126 iter 50 value 92.646724 iter 60 value 83.185873 iter 70 value 81.922674 iter 80 value 81.311302 iter 90 value 80.240479 iter 100 value 80.054603 final value 80.054603 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 97.987027 iter 10 value 94.367367 iter 20 value 90.537615 iter 30 value 86.464845 iter 40 value 83.505379 iter 50 value 83.336062 iter 60 value 83.137287 iter 70 value 82.635369 iter 80 value 82.460716 iter 90 value 82.382796 final value 82.381424 converged Fitting Repeat 5 # weights: 103 initial value 99.661920 iter 10 value 93.620703 iter 20 value 92.857635 iter 30 value 88.236906 iter 40 value 87.067106 iter 50 value 85.826086 iter 60 value 83.250047 iter 70 value 82.662294 iter 80 value 82.395883 final value 82.382524 converged Fitting Repeat 1 # weights: 305 initial value 107.038562 iter 10 value 94.487407 iter 20 value 93.111353 iter 30 value 86.392376 iter 40 value 81.255805 iter 50 value 80.278273 iter 60 value 80.100960 iter 70 value 79.583202 iter 80 value 79.547035 iter 90 value 79.532182 iter 100 value 79.507274 final value 79.507274 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 108.175087 iter 10 value 94.350316 iter 20 value 93.099778 iter 30 value 86.820596 iter 40 value 84.410735 iter 50 value 81.909339 iter 60 value 81.242806 iter 70 value 79.954998 iter 80 value 79.486945 iter 90 value 79.420893 iter 100 value 79.216307 final value 79.216307 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 100.035988 iter 10 value 94.505003 iter 20 value 93.946617 iter 30 value 85.593584 iter 40 value 82.297854 iter 50 value 81.743196 iter 60 value 80.711006 iter 70 value 79.523310 iter 80 value 79.334857 iter 90 value 79.190370 iter 100 value 79.110472 final value 79.110472 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 136.193111 iter 10 value 94.537199 iter 20 value 94.359642 iter 30 value 87.635231 iter 40 value 81.715053 iter 50 value 80.086472 iter 60 value 79.575463 iter 70 value 78.859438 iter 80 value 78.817546 iter 90 value 78.812053 iter 100 value 78.707601 final value 78.707601 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 113.096783 iter 10 value 94.067085 iter 20 value 84.980485 iter 30 value 82.967070 iter 40 value 82.020667 iter 50 value 80.276146 iter 60 value 79.384052 iter 70 value 78.794990 iter 80 value 78.555644 iter 90 value 78.438836 iter 100 value 78.405944 final value 78.405944 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 113.645102 iter 10 value 97.270931 iter 20 value 87.752670 iter 30 value 84.692125 iter 40 value 83.480730 iter 50 value 82.251988 iter 60 value 79.395717 iter 70 value 79.100285 iter 80 value 78.923169 iter 90 value 78.806641 iter 100 value 78.792361 final value 78.792361 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 107.003542 iter 10 value 94.344470 iter 20 value 90.718581 iter 30 value 85.731339 iter 40 value 85.076613 iter 50 value 84.899410 iter 60 value 84.818978 iter 70 value 83.358290 iter 80 value 82.934821 iter 90 value 82.546938 iter 100 value 82.067735 final value 82.067735 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 116.889750 iter 10 value 93.298303 iter 20 value 92.270820 iter 30 value 84.759936 iter 40 value 82.398229 iter 50 value 81.793523 iter 60 value 81.262987 iter 70 value 80.633614 iter 80 value 79.197299 iter 90 value 78.953416 iter 100 value 78.943658 final value 78.943658 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 107.738511 iter 10 value 93.739883 iter 20 value 91.807005 iter 30 value 85.617908 iter 40 value 84.526387 iter 50 value 82.956141 iter 60 value 81.020411 iter 70 value 80.028238 iter 80 value 79.508416 iter 90 value 79.381198 iter 100 value 79.366735 final value 79.366735 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 107.446663 iter 10 value 94.544864 iter 20 value 93.963342 iter 30 value 91.777526 iter 40 value 86.457173 iter 50 value 85.766193 iter 60 value 84.743410 iter 70 value 81.692379 iter 80 value 80.004664 iter 90 value 79.574052 iter 100 value 78.997183 final value 78.997183 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 94.743831 iter 10 value 88.842996 iter 20 value 84.372292 iter 30 value 84.370809 iter 40 value 82.138358 iter 50 value 81.638195 iter 60 value 81.629605 iter 70 value 81.580726 iter 80 value 81.548570 final value 81.548401 converged Fitting Repeat 2 # weights: 103 initial value 102.525360 final value 94.277038 converged Fitting Repeat 3 # weights: 103 initial value 96.965425 iter 10 value 94.485908 iter 20 value 94.484249 final value 94.484217 converged Fitting Repeat 4 # weights: 103 initial value 96.337498 final value 94.485838 converged Fitting Repeat 5 # weights: 103 initial value 97.817801 iter 10 value 94.485868 iter 20 value 94.484267 iter 30 value 93.863592 iter 40 value 93.542228 final value 93.542223 converged Fitting Repeat 1 # weights: 305 initial value 98.062221 iter 10 value 94.489188 iter 20 value 94.484228 iter 30 value 93.519093 iter 40 value 93.181114 iter 50 value 86.299004 iter 60 value 85.574623 iter 70 value 85.560415 final value 85.560410 converged Fitting Repeat 2 # weights: 305 initial value 114.542159 iter 10 value 94.281038 iter 20 value 94.279723 iter 30 value 90.546570 iter 40 value 84.183800 iter 50 value 83.840553 final value 83.840476 converged Fitting Repeat 3 # weights: 305 initial value 101.742177 iter 10 value 94.180668 iter 20 value 94.110368 iter 30 value 94.107129 iter 40 value 84.423315 iter 50 value 84.365570 iter 60 value 84.351310 iter 70 value 84.311928 iter 80 value 83.817903 iter 90 value 81.479823 iter 100 value 80.587653 final value 80.587653 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 110.397008 iter 10 value 94.489209 iter 20 value 94.282728 iter 30 value 88.596706 iter 40 value 84.380665 iter 50 value 84.373452 iter 60 value 84.302910 iter 70 value 81.565258 iter 80 value 81.474641 final value 81.474616 converged Fitting Repeat 5 # weights: 305 initial value 112.506702 iter 10 value 94.488883 iter 20 value 94.244440 iter 30 value 85.432139 iter 40 value 83.158626 iter 50 value 80.605025 iter 60 value 79.998720 iter 70 value 79.258743 iter 80 value 78.385297 iter 90 value 77.259802 iter 100 value 77.212641 final value 77.212641 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 101.955734 iter 10 value 92.332147 iter 20 value 92.026433 iter 30 value 91.200508 iter 40 value 91.199359 iter 50 value 84.906143 iter 60 value 84.594866 iter 70 value 81.312818 iter 80 value 78.912404 iter 90 value 78.683902 iter 100 value 78.024147 final value 78.024147 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 104.952327 iter 10 value 94.283723 iter 20 value 94.109689 iter 30 value 89.047584 iter 40 value 83.894248 iter 50 value 83.850688 iter 60 value 83.831876 iter 60 value 83.831875 iter 60 value 83.831875 final value 83.831875 converged Fitting Repeat 3 # weights: 507 initial value 96.885382 iter 10 value 93.566894 iter 20 value 93.530938 iter 30 value 88.038996 iter 40 value 86.268524 iter 50 value 86.267738 final value 86.267670 converged Fitting Repeat 4 # weights: 507 initial value 98.270026 iter 10 value 94.283616 iter 20 value 93.420640 iter 30 value 88.406477 iter 40 value 88.392955 iter 50 value 88.391443 final value 88.390796 converged Fitting Repeat 5 # weights: 507 initial value 98.083567 iter 10 value 94.492921 iter 20 value 94.444610 iter 30 value 81.634459 final value 81.633554 converged Fitting Repeat 1 # weights: 103 initial value 95.915272 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 101.237281 final value 94.032967 converged Fitting Repeat 3 # weights: 103 initial value 96.529782 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 94.135511 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 96.101280 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 107.523576 iter 10 value 93.856181 final value 93.855784 converged Fitting Repeat 2 # weights: 305 initial value 96.636282 final value 94.052910 converged Fitting Repeat 3 # weights: 305 initial value 97.367552 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 102.023028 iter 10 value 93.008970 final value 93.008966 converged Fitting Repeat 5 # weights: 305 initial value 113.845969 final value 94.052910 converged Fitting Repeat 1 # weights: 507 initial value 94.221938 final value 94.052910 converged Fitting Repeat 2 # weights: 507 initial value 99.894295 iter 10 value 92.748826 iter 20 value 86.013420 iter 30 value 84.997753 iter 40 value 84.770848 final value 84.768825 converged Fitting Repeat 3 # weights: 507 initial value 97.897580 final value 94.032967 converged Fitting Repeat 4 # weights: 507 initial value 101.731932 final value 94.052910 converged Fitting Repeat 5 # weights: 507 initial value 106.246164 iter 10 value 90.680421 iter 20 value 85.583093 iter 30 value 84.713751 iter 40 value 83.902404 iter 50 value 83.718230 iter 60 value 82.320204 iter 70 value 81.802143 iter 80 value 81.053890 iter 90 value 80.778169 iter 100 value 80.720172 final value 80.720172 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 96.544569 iter 10 value 94.055887 iter 20 value 89.184321 iter 30 value 87.175357 iter 40 value 85.352100 iter 50 value 85.170796 iter 60 value 84.151517 iter 70 value 83.713039 iter 80 value 83.272422 iter 90 value 82.746692 iter 100 value 82.679888 final value 82.679888 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 101.994582 iter 10 value 94.051685 iter 20 value 88.641568 iter 30 value 86.440551 iter 40 value 85.492547 iter 50 value 84.890727 iter 60 value 84.463492 final value 84.463377 converged Fitting Repeat 3 # weights: 103 initial value 100.082730 iter 10 value 93.117675 iter 20 value 87.741781 iter 30 value 86.057628 iter 40 value 85.640514 iter 50 value 85.593775 final value 85.593619 converged Fitting Repeat 4 # weights: 103 initial value 100.126580 iter 10 value 94.056149 iter 20 value 87.934931 iter 30 value 87.159390 iter 40 value 85.413295 iter 50 value 85.307812 iter 60 value 85.210266 iter 70 value 85.194116 final value 85.194067 converged Fitting Repeat 5 # weights: 103 initial value 96.101593 iter 10 value 94.058305 iter 20 value 93.982031 iter 30 value 93.404334 iter 40 value 88.215860 iter 50 value 86.994194 iter 60 value 86.314374 iter 70 value 84.367918 iter 80 value 83.210426 iter 90 value 82.766235 iter 100 value 82.582467 final value 82.582467 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 99.588967 iter 10 value 94.082609 iter 20 value 93.890229 iter 30 value 93.043853 iter 40 value 90.274894 iter 50 value 87.101490 iter 60 value 85.301068 iter 70 value 84.238870 iter 80 value 83.306975 iter 90 value 82.577618 iter 100 value 81.857058 final value 81.857058 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 110.598240 iter 10 value 96.189965 iter 20 value 92.524587 iter 30 value 90.252644 iter 40 value 89.089560 iter 50 value 86.270405 iter 60 value 85.923435 iter 70 value 85.585012 iter 80 value 84.672859 iter 90 value 82.819829 iter 100 value 82.482044 final value 82.482044 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 117.627073 iter 10 value 93.600892 iter 20 value 88.696425 iter 30 value 85.925940 iter 40 value 83.405918 iter 50 value 82.736805 iter 60 value 82.090239 iter 70 value 81.962479 iter 80 value 81.937191 iter 90 value 81.817616 iter 100 value 81.566527 final value 81.566527 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 105.209468 iter 10 value 93.173604 iter 20 value 86.943726 iter 30 value 86.485218 iter 40 value 86.069593 iter 50 value 85.332502 iter 60 value 84.641274 iter 70 value 83.535422 iter 80 value 83.080984 iter 90 value 82.560767 iter 100 value 82.093989 final value 82.093989 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 106.556388 iter 10 value 94.069021 iter 20 value 91.960175 iter 30 value 86.794488 iter 40 value 85.718244 iter 50 value 85.598674 iter 60 value 85.545436 iter 70 value 85.044560 iter 80 value 84.532362 iter 90 value 83.376147 iter 100 value 82.643302 final value 82.643302 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 119.435207 iter 10 value 94.255118 iter 20 value 91.896195 iter 30 value 87.083337 iter 40 value 86.415375 iter 50 value 86.031509 iter 60 value 85.528287 iter 70 value 85.343305 iter 80 value 84.909185 iter 90 value 83.891001 iter 100 value 82.661303 final value 82.661303 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 118.037356 iter 10 value 93.995052 iter 20 value 91.707468 iter 30 value 86.467049 iter 40 value 86.210136 iter 50 value 85.552988 iter 60 value 82.811301 iter 70 value 82.146399 iter 80 value 82.008083 iter 90 value 81.892948 iter 100 value 81.683588 final value 81.683588 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 103.603045 iter 10 value 93.992929 iter 20 value 89.812607 iter 30 value 85.797663 iter 40 value 83.390816 iter 50 value 82.994558 iter 60 value 82.479268 iter 70 value 82.221703 iter 80 value 81.884092 iter 90 value 81.687318 iter 100 value 81.566125 final value 81.566125 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 126.057573 iter 10 value 94.291019 iter 20 value 90.546477 iter 30 value 88.136305 iter 40 value 85.642593 iter 50 value 84.498437 iter 60 value 83.339429 iter 70 value 83.215150 iter 80 value 82.822323 iter 90 value 82.294088 iter 100 value 81.775107 final value 81.775107 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 106.304310 iter 10 value 94.077838 iter 20 value 93.101509 iter 30 value 88.992876 iter 40 value 84.512008 iter 50 value 83.585376 iter 60 value 82.477830 iter 70 value 81.994653 iter 80 value 81.613037 iter 90 value 81.047766 iter 100 value 80.883109 final value 80.883109 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 105.020357 final value 94.054680 converged Fitting Repeat 2 # weights: 103 initial value 96.869312 final value 94.054613 converged Fitting Repeat 3 # weights: 103 initial value 96.283055 final value 94.054556 converged Fitting Repeat 4 # weights: 103 initial value 101.421218 iter 10 value 94.034917 iter 20 value 94.032361 iter 30 value 90.257308 iter 40 value 86.948421 final value 86.938454 converged Fitting Repeat 5 # weights: 103 initial value 94.438013 final value 94.054870 converged Fitting Repeat 1 # weights: 305 initial value 97.879645 iter 10 value 94.057697 iter 20 value 94.052997 iter 30 value 87.395788 iter 40 value 87.378004 iter 50 value 87.377189 iter 60 value 87.249762 iter 70 value 87.248680 iter 70 value 87.248680 final value 87.248680 converged Fitting Repeat 2 # weights: 305 initial value 97.561259 iter 10 value 94.057699 iter 20 value 94.023087 iter 30 value 89.065464 iter 40 value 87.119045 iter 50 value 86.931389 iter 60 value 86.930345 iter 70 value 86.930308 iter 70 value 86.930308 iter 70 value 86.930308 final value 86.930308 converged Fitting Repeat 3 # weights: 305 initial value 98.654342 iter 10 value 94.056843 iter 20 value 94.052908 iter 30 value 93.769688 iter 40 value 93.766238 iter 50 value 92.910757 iter 60 value 90.874139 iter 70 value 90.859700 iter 80 value 88.372396 iter 90 value 87.544089 iter 100 value 87.509102 final value 87.509102 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 98.274494 iter 10 value 94.057586 iter 20 value 91.552735 iter 30 value 86.809311 iter 40 value 86.784642 iter 50 value 86.783318 final value 86.781628 converged Fitting Repeat 5 # weights: 305 initial value 108.054619 iter 10 value 94.057738 iter 20 value 94.024664 iter 30 value 93.383295 final value 93.371986 converged Fitting Repeat 1 # weights: 507 initial value 97.824087 iter 10 value 94.041272 iter 20 value 94.034466 final value 94.034083 converged Fitting Repeat 2 # weights: 507 initial value 99.252485 iter 10 value 94.041330 iter 20 value 94.032552 iter 30 value 87.479140 iter 40 value 87.377278 iter 50 value 87.218161 iter 60 value 87.066513 iter 70 value 87.042218 iter 70 value 87.042218 iter 70 value 87.042218 final value 87.042218 converged Fitting Repeat 3 # weights: 507 initial value 99.613791 iter 10 value 94.060063 iter 20 value 94.020603 iter 30 value 92.041400 iter 40 value 90.508148 iter 50 value 90.431836 iter 60 value 90.431079 iter 70 value 90.259793 iter 80 value 89.731184 iter 90 value 89.077036 iter 100 value 84.549665 final value 84.549665 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 109.295644 iter 10 value 87.618905 iter 20 value 87.616425 iter 30 value 87.259920 iter 40 value 87.259439 iter 50 value 87.256994 iter 60 value 87.232772 final value 87.232582 converged Fitting Repeat 5 # weights: 507 initial value 110.697138 iter 10 value 93.207282 iter 20 value 90.954945 iter 30 value 90.729492 iter 40 value 90.727587 iter 50 value 90.721321 iter 60 value 90.716076 iter 70 value 90.714643 iter 80 value 90.714541 iter 90 value 90.714401 iter 100 value 90.713065 final value 90.713065 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 128.913221 iter 10 value 122.838249 iter 20 value 118.444788 iter 30 value 112.871781 iter 40 value 111.896981 iter 50 value 109.352753 iter 60 value 108.363050 iter 70 value 105.668210 iter 80 value 105.015793 iter 90 value 104.466541 iter 100 value 103.229909 final value 103.229909 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 134.023610 iter 10 value 117.961111 iter 20 value 117.772695 iter 30 value 110.274748 iter 40 value 109.808670 iter 50 value 106.836114 iter 60 value 105.948349 iter 70 value 105.439870 iter 80 value 105.212146 iter 90 value 104.988340 iter 100 value 104.937333 final value 104.937333 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 140.070119 iter 10 value 117.786477 iter 20 value 113.886030 iter 30 value 110.512080 iter 40 value 109.751493 iter 50 value 104.570209 iter 60 value 103.861541 iter 70 value 102.711026 iter 80 value 101.315311 iter 90 value 100.902068 iter 100 value 100.842487 final value 100.842487 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 123.841837 iter 10 value 118.051263 iter 20 value 114.636914 iter 30 value 109.459812 iter 40 value 108.750509 iter 50 value 108.501026 iter 60 value 108.361308 iter 70 value 104.943987 iter 80 value 103.960291 iter 90 value 101.808046 iter 100 value 101.355854 final value 101.355854 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 137.663242 iter 10 value 117.807336 iter 20 value 117.594623 iter 30 value 109.067876 iter 40 value 107.939425 iter 50 value 104.676817 iter 60 value 102.975415 iter 70 value 102.229714 iter 80 value 101.917442 iter 90 value 101.701760 iter 100 value 101.646323 final value 101.646323 stopped after 100 iterations svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Tue Jun 6 00:16:15 2023 *********************************************** Number of test functions: 7 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 7 test functions, 0 errors, 0 failures Number of test functions: 7 Number of errors: 0 Number of failures: 0 Warning messages: 1: `repeats` has no meaning for this resampling method. 2: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 54.131 1.516 68.765
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 37.730 | 0.455 | 38.248 | |
FreqInteractors | 0.301 | 0.000 | 0.303 | |
calculateAAC | 0.040 | 0.004 | 0.043 | |
calculateAutocor | 0.712 | 0.020 | 0.734 | |
calculateCTDC | 0.106 | 0.000 | 0.106 | |
calculateCTDD | 0.835 | 0.004 | 0.840 | |
calculateCTDT | 0.271 | 0.016 | 0.287 | |
calculateCTriad | 0.436 | 0.012 | 0.449 | |
calculateDC | 0.128 | 0.004 | 0.132 | |
calculateF | 0.429 | 0.000 | 0.430 | |
calculateKSAAP | 0.140 | 0.004 | 0.144 | |
calculateQD_Sm | 2.307 | 0.048 | 2.360 | |
calculateTC | 2.403 | 0.040 | 2.447 | |
calculateTC_Sm | 0.314 | 0.000 | 0.314 | |
corr_plot | 38.268 | 0.415 | 38.748 | |
enrichfindP | 0.426 | 0.012 | 15.856 | |
enrichfind_hp | 0.051 | 0.000 | 1.144 | |
enrichplot | 0.358 | 0.016 | 0.374 | |
filter_missing_values | 0.002 | 0.000 | 0.001 | |
getFASTA | 0.074 | 0.008 | 7.451 | |
getHPI | 0 | 0 | 0 | |
get_negativePPI | 0.002 | 0.000 | 0.002 | |
get_positivePPI | 0 | 0 | 0 | |
impute_missing_data | 0.001 | 0.000 | 0.001 | |
plotPPI | 0.076 | 0.000 | 0.076 | |
pred_ensembel | 18.076 | 0.294 | 16.057 | |
var_imp | 39.933 | 0.717 | 40.755 | |