| Back to Build/check report for BioC 3.18: simplified long |
|
This page was generated on 2023-06-06 11:00:33 -0000 (Tue, 06 Jun 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.3.0 (2023-04-21) -- "Already Tomorrow" | 4366 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the HPiP package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details. |
| Package 937/2199 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| HPiP 1.7.0 (landing page) Matineh Rahmatbakhsh
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | OK | |||||||||
| Package: HPiP |
| Version: 1.7.0 |
| Command: /home/biocbuild/R/R-4.3.0/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/R/R-4.3.0/site-library --timings HPiP_1.7.0.tar.gz |
| StartedAt: 2023-06-06 00:10:31 -0000 (Tue, 06 Jun 2023) |
| EndedAt: 2023-06-06 00:26:32 -0000 (Tue, 06 Jun 2023) |
| EllapsedTime: 961.4 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: HPiP.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/R/R-4.3.0/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/R/R-4.3.0/site-library --timings HPiP_1.7.0.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.18-bioc/meat/HPiP.Rcheck’
* using R version 4.3.0 (2023-04-21)
* using platform: aarch64-unknown-linux-gnu (64-bit)
* R was compiled by
gcc (GCC) 10.3.1
GNU Fortran (GCC) 10.3.1
* running under: openEuler 22.03 (LTS-SP1)
* using session charset: UTF-8
* checking for file ‘HPiP/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘HPiP’ version ‘1.7.0’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘HPiP’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... NOTE
Package unavailable to check Rd xrefs: ‘ftrCOOL’
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking R/sysdata.rda ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
var_imp 39.933 0.717 40.755
corr_plot 38.268 0.415 38.748
FSmethod 37.730 0.455 38.248
pred_ensembel 18.076 0.294 16.057
enrichfindP 0.426 0.012 15.856
getFASTA 0.074 0.008 7.451
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘runTests.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ...
‘HPiP_tutorial.Rmd’ using ‘UTF-8’... OK
NONE
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 1 NOTE
See
‘/home/biocbuild/bbs-3.18-bioc/meat/HPiP.Rcheck/00check.log’
for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R-4.3.0/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/R/R-4.3.0/site-library’ * installing *source* package ‘HPiP’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R version 4.3.0 (2023-04-21) -- "Already Tomorrow"
Copyright (C) 2023 The R Foundation for Statistical Computing
Platform: aarch64-unknown-linux-gnu (64-bit)
R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.
R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.
Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.
> BiocGenerics:::testPackage('HPiP')
No results to show
Please make sure that the organism is correct or set significant = FALSE
No results to show
Please make sure that the organism is correct or set significant = FALSE
No results to show
Please make sure that the organism is correct or set significant = FALSE
No results to show
Please make sure that the organism is correct or set significant = FALSE
No results to show
Please make sure that the organism is correct or set significant = FALSE
No results to show
Please make sure that the organism is correct or set significant = FALSE
No results to show
Please make sure that the organism is correct or set significant = FALSE
No results to show
Please make sure that the organism is correct or set significant = FALSE
avNNet
Loading required package: ggplot2
Loading required package: lattice
Fitting Repeat 1
# weights: 103
initial value 101.873314
final value 94.484211
converged
Fitting Repeat 2
# weights: 103
initial value 96.874924
final value 94.484211
converged
Fitting Repeat 3
# weights: 103
initial value 116.484083
final value 94.252921
converged
Fitting Repeat 4
# weights: 103
initial value 104.946891
final value 94.466823
converged
Fitting Repeat 5
# weights: 103
initial value 98.548644
final value 94.484211
converged
Fitting Repeat 1
# weights: 305
initial value 103.429637
iter 10 value 92.001576
iter 20 value 90.085107
iter 30 value 90.077844
final value 90.077811
converged
Fitting Repeat 2
# weights: 305
initial value 102.017425
final value 94.484211
converged
Fitting Repeat 3
# weights: 305
initial value 103.487676
iter 10 value 91.034768
iter 20 value 85.999363
iter 30 value 84.435385
iter 40 value 84.429523
final value 84.429415
converged
Fitting Repeat 4
# weights: 305
initial value 97.006879
final value 94.484212
converged
Fitting Repeat 5
# weights: 305
initial value 95.269624
final value 94.466823
converged
Fitting Repeat 1
# weights: 507
initial value 97.057565
final value 94.484211
converged
Fitting Repeat 2
# weights: 507
initial value 97.599126
final value 94.484211
converged
Fitting Repeat 3
# weights: 507
initial value 95.961469
iter 10 value 93.496112
iter 20 value 93.484136
final value 93.484123
converged
Fitting Repeat 4
# weights: 507
initial value 124.788664
final value 94.252920
converged
Fitting Repeat 5
# weights: 507
initial value 102.122426
final value 94.484211
converged
Fitting Repeat 1
# weights: 103
initial value 98.545384
iter 10 value 94.233853
iter 20 value 94.040394
iter 30 value 93.394982
iter 40 value 90.054907
iter 50 value 89.203255
iter 60 value 87.344259
iter 70 value 87.090929
iter 80 value 87.031849
final value 87.031733
converged
Fitting Repeat 2
# weights: 103
initial value 103.545236
iter 10 value 94.488529
iter 20 value 93.935490
iter 30 value 91.286991
iter 40 value 89.916365
iter 50 value 89.542259
iter 60 value 89.306235
iter 70 value 85.510224
iter 80 value 85.050598
iter 90 value 84.646082
final value 84.646016
converged
Fitting Repeat 3
# weights: 103
initial value 96.881867
iter 10 value 94.406695
iter 20 value 88.203458
iter 30 value 85.963596
iter 40 value 85.519748
iter 50 value 85.269325
iter 60 value 84.717005
iter 70 value 84.646019
final value 84.646016
converged
Fitting Repeat 4
# weights: 103
initial value 99.501462
iter 10 value 94.486436
iter 20 value 93.927018
iter 30 value 93.733266
iter 40 value 88.093362
iter 50 value 87.499146
iter 60 value 86.884407
iter 70 value 86.348265
iter 80 value 86.313150
iter 90 value 86.308457
final value 86.308445
converged
Fitting Repeat 5
# weights: 103
initial value 97.689977
iter 10 value 94.452089
iter 20 value 93.859069
iter 30 value 93.729373
iter 40 value 91.996842
iter 50 value 90.079738
iter 60 value 89.627788
iter 70 value 89.409521
iter 80 value 86.538500
iter 90 value 86.322908
iter 100 value 86.308531
final value 86.308531
stopped after 100 iterations
Fitting Repeat 1
# weights: 305
initial value 110.486181
iter 10 value 90.952345
iter 20 value 89.112802
iter 30 value 87.869995
iter 40 value 87.563366
iter 50 value 85.667270
iter 60 value 85.091589
iter 70 value 84.971554
iter 80 value 84.192274
iter 90 value 84.069117
iter 100 value 84.064568
final value 84.064568
stopped after 100 iterations
Fitting Repeat 2
# weights: 305
initial value 101.831221
iter 10 value 94.546793
iter 20 value 94.425315
iter 30 value 94.097141
iter 40 value 90.227950
iter 50 value 86.912409
iter 60 value 86.128852
iter 70 value 84.780192
iter 80 value 84.154645
iter 90 value 84.052474
iter 100 value 83.965281
final value 83.965281
stopped after 100 iterations
Fitting Repeat 3
# weights: 305
initial value 103.708597
iter 10 value 94.432507
iter 20 value 88.794123
iter 30 value 86.283452
iter 40 value 84.965763
iter 50 value 84.775092
iter 60 value 84.540298
iter 70 value 84.517625
final value 84.517504
converged
Fitting Repeat 4
# weights: 305
initial value 109.905775
iter 10 value 94.493216
iter 20 value 87.911246
iter 30 value 86.981597
iter 40 value 86.230550
iter 50 value 85.965652
iter 60 value 85.952643
iter 70 value 85.613152
iter 80 value 84.249373
iter 90 value 84.128425
iter 100 value 84.087089
final value 84.087089
stopped after 100 iterations
Fitting Repeat 5
# weights: 305
initial value 103.304240
iter 10 value 94.309854
iter 20 value 92.583526
iter 30 value 87.926337
iter 40 value 84.847410
iter 50 value 84.442683
iter 60 value 84.323639
iter 70 value 84.234089
iter 80 value 83.958524
iter 90 value 83.530450
iter 100 value 83.265098
final value 83.265098
stopped after 100 iterations
Fitting Repeat 1
# weights: 507
initial value 105.609773
iter 10 value 94.713513
iter 20 value 93.554529
iter 30 value 91.199179
iter 40 value 88.833469
iter 50 value 87.988002
iter 60 value 85.260207
iter 70 value 84.814795
iter 80 value 84.500316
iter 90 value 83.690236
iter 100 value 83.278427
final value 83.278427
stopped after 100 iterations
Fitting Repeat 2
# weights: 507
initial value 119.632214
iter 10 value 94.276562
iter 20 value 91.816405
iter 30 value 85.981396
iter 40 value 84.308574
iter 50 value 83.362788
iter 60 value 83.188245
iter 70 value 83.006530
iter 80 value 82.887623
iter 90 value 82.804972
iter 100 value 82.762184
final value 82.762184
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 134.930961
iter 10 value 94.604303
iter 20 value 94.089816
iter 30 value 91.891233
iter 40 value 85.346048
iter 50 value 84.476522
iter 60 value 84.055256
iter 70 value 83.736240
iter 80 value 83.575043
iter 90 value 83.470994
iter 100 value 83.168602
final value 83.168602
stopped after 100 iterations
Fitting Repeat 4
# weights: 507
initial value 104.252912
iter 10 value 94.387274
iter 20 value 90.500537
iter 30 value 88.413259
iter 40 value 87.017545
iter 50 value 86.537109
iter 60 value 86.043638
iter 70 value 85.628228
iter 80 value 84.528009
iter 90 value 84.370781
iter 100 value 84.284199
final value 84.284199
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 106.706797
iter 10 value 94.527160
iter 20 value 93.581998
iter 30 value 93.326309
iter 40 value 92.146970
iter 50 value 91.572601
iter 60 value 89.176480
iter 70 value 87.379910
iter 80 value 84.826119
iter 90 value 83.787060
iter 100 value 83.394817
final value 83.394817
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 95.528867
final value 94.485975
converged
Fitting Repeat 2
# weights: 103
initial value 103.368465
final value 94.485843
converged
Fitting Repeat 3
# weights: 103
initial value 105.557710
final value 94.486049
converged
Fitting Repeat 4
# weights: 103
initial value 95.737729
final value 94.485921
converged
Fitting Repeat 5
# weights: 103
initial value 106.001633
final value 94.485962
converged
Fitting Repeat 1
# weights: 305
initial value 99.067294
iter 10 value 94.489409
iter 20 value 94.484476
iter 30 value 94.264865
iter 40 value 93.881478
iter 50 value 87.074193
iter 60 value 86.736057
final value 86.736004
converged
Fitting Repeat 2
# weights: 305
initial value 103.699669
iter 10 value 94.269266
iter 20 value 94.262009
iter 30 value 93.905031
iter 40 value 87.530675
final value 86.944500
converged
Fitting Repeat 3
# weights: 305
initial value 115.884394
iter 10 value 94.257629
iter 20 value 94.244347
iter 30 value 93.967778
iter 40 value 93.915499
iter 50 value 93.904945
final value 93.904916
converged
Fitting Repeat 4
# weights: 305
initial value 99.298202
iter 10 value 94.489156
iter 20 value 94.451026
iter 30 value 92.930905
iter 40 value 92.366738
final value 92.365244
converged
Fitting Repeat 5
# weights: 305
initial value 96.449114
iter 10 value 91.514085
iter 20 value 91.340548
iter 30 value 91.217060
iter 40 value 91.212964
iter 50 value 91.193554
iter 60 value 91.178916
iter 70 value 91.175899
iter 80 value 90.946826
final value 90.877550
converged
Fitting Repeat 1
# weights: 507
initial value 123.063067
iter 10 value 94.474712
iter 20 value 94.467206
iter 30 value 94.148033
iter 40 value 93.444303
iter 50 value 93.418229
iter 60 value 92.582452
iter 70 value 92.527505
iter 80 value 92.527391
final value 92.527165
converged
Fitting Repeat 2
# weights: 507
initial value 100.137535
iter 10 value 94.474845
iter 20 value 94.468089
iter 30 value 94.462755
iter 40 value 89.942485
iter 50 value 89.487274
final value 89.325445
converged
Fitting Repeat 3
# weights: 507
initial value 100.592256
iter 10 value 93.668740
iter 20 value 89.770402
iter 30 value 85.202141
iter 40 value 84.778253
iter 50 value 84.751507
iter 60 value 84.050144
iter 70 value 83.822445
iter 80 value 83.811645
iter 90 value 82.830902
iter 100 value 82.604113
final value 82.604113
stopped after 100 iterations
Fitting Repeat 4
# weights: 507
initial value 98.462886
iter 10 value 94.474230
iter 20 value 94.405029
iter 30 value 92.295968
iter 40 value 92.067324
iter 50 value 91.862267
final value 91.862250
converged
Fitting Repeat 5
# weights: 507
initial value 96.073761
iter 10 value 94.474670
iter 20 value 94.169222
iter 30 value 93.977196
iter 40 value 90.533093
iter 50 value 86.961385
iter 60 value 86.944278
iter 70 value 86.858479
iter 80 value 86.679317
iter 90 value 86.331884
iter 100 value 86.214214
final value 86.214214
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 103.260013
final value 94.484211
converged
Fitting Repeat 2
# weights: 103
initial value 95.526112
final value 94.026542
converged
Fitting Repeat 3
# weights: 103
initial value 105.806013
final value 94.484211
converged
Fitting Repeat 4
# weights: 103
initial value 96.890866
iter 10 value 94.026542
iter 10 value 94.026542
iter 10 value 94.026542
final value 94.026542
converged
Fitting Repeat 5
# weights: 103
initial value 98.218205
final value 94.484211
converged
Fitting Repeat 1
# weights: 305
initial value 127.065383
final value 94.484211
converged
Fitting Repeat 2
# weights: 305
initial value 100.861639
iter 10 value 94.499627
final value 94.484135
converged
Fitting Repeat 3
# weights: 305
initial value 103.196230
iter 10 value 94.474338
final value 94.474336
converged
Fitting Repeat 4
# weights: 305
initial value 108.884633
final value 94.484211
converged
Fitting Repeat 5
# weights: 305
initial value 99.141746
final value 94.484211
converged
Fitting Repeat 1
# weights: 507
initial value 131.104731
final value 94.484211
converged
Fitting Repeat 2
# weights: 507
initial value 102.855313
final value 94.461207
converged
Fitting Repeat 3
# weights: 507
initial value 114.594012
final value 94.484211
converged
Fitting Repeat 4
# weights: 507
initial value 99.678164
final value 94.484211
converged
Fitting Repeat 5
# weights: 507
initial value 103.435634
final value 94.484211
converged
Fitting Repeat 1
# weights: 103
initial value 99.347229
iter 10 value 94.489066
iter 20 value 94.243106
iter 30 value 94.213388
iter 40 value 94.188069
iter 50 value 87.947838
iter 60 value 86.425139
iter 70 value 85.911287
iter 80 value 85.807005
iter 90 value 85.747443
iter 100 value 85.643484
final value 85.643484
stopped after 100 iterations
Fitting Repeat 2
# weights: 103
initial value 96.573364
iter 10 value 94.490181
iter 20 value 93.328141
iter 30 value 86.737433
iter 40 value 84.103515
iter 50 value 83.835076
iter 60 value 83.732504
iter 70 value 83.490628
iter 80 value 83.361281
iter 90 value 83.323890
iter 100 value 83.319510
final value 83.319510
stopped after 100 iterations
Fitting Repeat 3
# weights: 103
initial value 98.803550
iter 10 value 94.486328
iter 20 value 89.160550
iter 30 value 87.429763
iter 40 value 85.452376
iter 50 value 84.655768
iter 60 value 83.667282
iter 70 value 83.385988
iter 80 value 83.333392
iter 90 value 83.319596
final value 83.319493
converged
Fitting Repeat 4
# weights: 103
initial value 96.663129
iter 10 value 94.449545
iter 20 value 94.127454
iter 30 value 94.125946
iter 40 value 93.790957
iter 50 value 87.330329
iter 60 value 86.524997
iter 70 value 86.436371
iter 80 value 86.392465
iter 90 value 86.339403
iter 100 value 84.189298
final value 84.189298
stopped after 100 iterations
Fitting Repeat 5
# weights: 103
initial value 102.856613
iter 10 value 92.156911
iter 20 value 88.349722
iter 30 value 87.721957
iter 40 value 86.802583
iter 50 value 84.834152
iter 60 value 83.620277
iter 70 value 83.468482
iter 80 value 83.321890
iter 90 value 83.319510
final value 83.319493
converged
Fitting Repeat 1
# weights: 305
initial value 99.325228
iter 10 value 94.445984
iter 20 value 89.985486
iter 30 value 88.529604
iter 40 value 86.197930
iter 50 value 82.224467
iter 60 value 81.934975
iter 70 value 81.489589
iter 80 value 81.322533
iter 90 value 80.659648
iter 100 value 80.281436
final value 80.281436
stopped after 100 iterations
Fitting Repeat 2
# weights: 305
initial value 118.640688
iter 10 value 93.285321
iter 20 value 88.782471
iter 30 value 86.810535
iter 40 value 85.938865
iter 50 value 85.820380
iter 60 value 85.788853
iter 70 value 85.587546
iter 80 value 82.681832
iter 90 value 81.705270
iter 100 value 80.996327
final value 80.996327
stopped after 100 iterations
Fitting Repeat 3
# weights: 305
initial value 101.500224
iter 10 value 91.525686
iter 20 value 86.762820
iter 30 value 86.197679
iter 40 value 85.903945
iter 50 value 84.832322
iter 60 value 83.712212
iter 70 value 83.299594
iter 80 value 83.193643
iter 90 value 83.042488
iter 100 value 82.933548
final value 82.933548
stopped after 100 iterations
Fitting Repeat 4
# weights: 305
initial value 100.462654
iter 10 value 94.578551
iter 20 value 91.484183
iter 30 value 89.297354
iter 40 value 84.034763
iter 50 value 83.725841
iter 60 value 83.390202
iter 70 value 82.206792
iter 80 value 82.134774
iter 90 value 82.005280
iter 100 value 81.486417
final value 81.486417
stopped after 100 iterations
Fitting Repeat 5
# weights: 305
initial value 99.690500
iter 10 value 94.516524
iter 20 value 88.383560
iter 30 value 84.687386
iter 40 value 83.843324
iter 50 value 83.612710
iter 60 value 83.496058
iter 70 value 83.407601
iter 80 value 83.289274
iter 90 value 83.266554
iter 100 value 82.186152
final value 82.186152
stopped after 100 iterations
Fitting Repeat 1
# weights: 507
initial value 126.332748
iter 10 value 94.212212
iter 20 value 94.093091
iter 30 value 92.859714
iter 40 value 84.859550
iter 50 value 83.510727
iter 60 value 81.565453
iter 70 value 80.586131
iter 80 value 80.402974
iter 90 value 80.264976
iter 100 value 80.151184
final value 80.151184
stopped after 100 iterations
Fitting Repeat 2
# weights: 507
initial value 123.999615
iter 10 value 94.621664
iter 20 value 91.606845
iter 30 value 88.497783
iter 40 value 87.675340
iter 50 value 83.200795
iter 60 value 81.927443
iter 70 value 81.424137
iter 80 value 81.214423
iter 90 value 80.889256
iter 100 value 80.802670
final value 80.802670
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 117.088808
iter 10 value 94.660584
iter 20 value 94.122746
iter 30 value 87.008399
iter 40 value 86.165144
iter 50 value 85.116275
iter 60 value 84.275236
iter 70 value 83.682135
iter 80 value 83.107184
iter 90 value 82.952728
iter 100 value 82.860564
final value 82.860564
stopped after 100 iterations
Fitting Repeat 4
# weights: 507
initial value 104.908625
iter 10 value 94.514732
iter 20 value 93.330556
iter 30 value 87.321678
iter 40 value 84.508632
iter 50 value 84.071948
iter 60 value 82.571199
iter 70 value 81.817080
iter 80 value 81.499370
iter 90 value 81.163540
iter 100 value 80.825501
final value 80.825501
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 110.742703
iter 10 value 90.725031
iter 20 value 87.919620
iter 30 value 83.099509
iter 40 value 81.688494
iter 50 value 81.151501
iter 60 value 80.875413
iter 70 value 80.624715
iter 80 value 80.446417
iter 90 value 80.345588
iter 100 value 80.298430
final value 80.298430
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 96.223639
iter 10 value 94.486048
final value 94.485966
converged
Fitting Repeat 2
# weights: 103
initial value 100.027608
final value 94.485862
converged
Fitting Repeat 3
# weights: 103
initial value 99.901229
final value 94.485939
converged
Fitting Repeat 4
# weights: 103
initial value 97.617481
final value 94.486111
converged
Fitting Repeat 5
# weights: 103
initial value 101.227208
final value 94.485677
converged
Fitting Repeat 1
# weights: 305
initial value 97.315371
iter 10 value 94.475384
iter 20 value 94.030770
iter 30 value 94.028465
iter 40 value 94.026710
iter 50 value 94.026365
final value 94.026345
converged
Fitting Repeat 2
# weights: 305
initial value 133.672760
iter 10 value 94.488675
iter 20 value 94.264974
iter 30 value 94.031265
iter 40 value 94.027312
iter 50 value 93.794517
iter 60 value 89.126286
iter 70 value 88.531812
iter 80 value 88.524033
iter 90 value 88.523706
final value 88.523668
converged
Fitting Repeat 3
# weights: 305
initial value 111.302048
iter 10 value 94.087672
iter 20 value 94.081951
iter 30 value 94.079895
iter 40 value 94.046129
iter 50 value 94.027908
final value 94.027882
converged
Fitting Repeat 4
# weights: 305
initial value 96.347823
iter 10 value 94.488207
iter 20 value 94.484183
iter 30 value 94.278203
iter 40 value 91.854618
iter 50 value 86.495293
iter 60 value 84.408043
iter 70 value 83.872903
final value 83.812634
converged
Fitting Repeat 5
# weights: 305
initial value 98.106293
iter 10 value 94.489066
iter 20 value 94.139967
final value 94.026774
converged
Fitting Repeat 1
# weights: 507
initial value 98.785316
iter 10 value 94.034425
iter 20 value 94.029214
iter 30 value 93.880677
iter 40 value 89.870134
iter 50 value 85.534732
iter 60 value 81.913933
iter 70 value 81.865751
iter 80 value 81.584688
iter 90 value 81.347107
iter 100 value 81.344513
final value 81.344513
stopped after 100 iterations
Fitting Repeat 2
# weights: 507
initial value 99.506332
iter 10 value 92.845492
iter 20 value 92.845249
iter 20 value 92.845249
final value 92.845246
converged
Fitting Repeat 3
# weights: 507
initial value 94.714513
iter 10 value 85.777413
iter 20 value 84.794382
iter 30 value 84.766359
iter 40 value 84.422126
iter 50 value 84.360275
iter 60 value 84.328500
final value 84.324554
converged
Fitting Repeat 4
# weights: 507
initial value 100.840918
iter 10 value 94.491764
iter 20 value 94.361981
iter 30 value 92.075577
iter 40 value 87.365692
iter 50 value 87.141520
iter 60 value 82.765973
iter 70 value 82.163614
iter 80 value 82.025069
iter 90 value 81.736341
iter 100 value 81.713540
final value 81.713540
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 96.892203
iter 10 value 94.489494
iter 20 value 94.425184
iter 30 value 94.025022
iter 40 value 87.228163
iter 50 value 86.938724
iter 60 value 85.978708
iter 70 value 83.731306
iter 80 value 83.697281
iter 90 value 83.494580
iter 100 value 82.893393
final value 82.893393
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 98.818418
final value 94.052910
converged
Fitting Repeat 2
# weights: 103
initial value 100.698502
final value 94.052910
converged
Fitting Repeat 3
# weights: 103
initial value 104.220112
final value 94.052910
converged
Fitting Repeat 4
# weights: 103
initial value 105.599530
final value 94.052910
converged
Fitting Repeat 5
# weights: 103
initial value 103.255768
final value 94.052910
converged
Fitting Repeat 1
# weights: 305
initial value 102.540250
final value 94.052910
converged
Fitting Repeat 2
# weights: 305
initial value 107.993040
iter 10 value 93.454489
final value 93.288889
converged
Fitting Repeat 3
# weights: 305
initial value 107.856430
iter 10 value 94.008696
iter 10 value 94.008696
iter 10 value 94.008696
final value 94.008696
converged
Fitting Repeat 4
# weights: 305
initial value 108.889396
final value 94.052910
converged
Fitting Repeat 5
# weights: 305
initial value 91.794749
iter 10 value 82.048034
iter 20 value 81.844503
iter 30 value 81.830138
final value 81.829860
converged
Fitting Repeat 1
# weights: 507
initial value 99.839076
final value 94.052910
converged
Fitting Repeat 2
# weights: 507
initial value 104.575326
final value 94.052910
converged
Fitting Repeat 3
# weights: 507
initial value 100.936577
final value 94.052910
converged
Fitting Repeat 4
# weights: 507
initial value 131.458200
iter 10 value 94.052910
iter 10 value 94.052910
iter 10 value 94.052910
final value 94.052910
converged
Fitting Repeat 5
# weights: 507
initial value 106.064877
final value 94.052910
converged
Fitting Repeat 1
# weights: 103
initial value 104.075635
iter 10 value 93.969735
iter 20 value 93.074554
iter 30 value 85.177836
iter 40 value 80.375241
iter 50 value 79.574719
iter 60 value 79.030595
iter 70 value 78.948485
iter 80 value 78.946670
iter 80 value 78.946669
iter 80 value 78.946669
final value 78.946669
converged
Fitting Repeat 2
# weights: 103
initial value 98.784256
iter 10 value 93.893389
iter 20 value 91.146818
iter 30 value 89.793145
iter 40 value 89.695469
iter 50 value 89.658739
iter 60 value 82.387262
iter 70 value 79.870917
iter 80 value 78.804009
iter 90 value 77.908737
iter 100 value 77.512651
final value 77.512651
stopped after 100 iterations
Fitting Repeat 3
# weights: 103
initial value 96.062781
iter 10 value 93.689936
iter 20 value 86.774088
iter 30 value 80.781939
iter 40 value 78.609353
iter 50 value 78.176449
iter 60 value 77.559188
iter 70 value 77.287600
iter 80 value 77.259540
iter 90 value 77.155732
final value 77.113791
converged
Fitting Repeat 4
# weights: 103
initial value 95.905320
iter 10 value 93.942202
iter 20 value 81.729947
iter 30 value 80.299390
iter 40 value 80.163315
iter 50 value 79.877103
iter 60 value 79.103467
iter 70 value 78.698020
iter 80 value 78.689009
final value 78.689004
converged
Fitting Repeat 5
# weights: 103
initial value 105.466195
iter 10 value 94.014876
iter 20 value 89.387647
iter 30 value 82.595518
iter 40 value 81.800584
iter 50 value 81.484023
iter 60 value 81.362901
iter 70 value 81.353512
iter 80 value 81.343491
final value 81.343333
converged
Fitting Repeat 1
# weights: 305
initial value 100.551753
iter 10 value 91.119304
iter 20 value 81.961376
iter 30 value 80.107727
iter 40 value 78.276667
iter 50 value 76.322380
iter 60 value 76.056506
iter 70 value 75.573628
iter 80 value 75.376379
iter 90 value 75.266750
iter 100 value 75.241262
final value 75.241262
stopped after 100 iterations
Fitting Repeat 2
# weights: 305
initial value 105.975565
iter 10 value 94.180062
iter 20 value 92.898339
iter 30 value 91.000364
iter 40 value 88.849258
iter 50 value 88.649210
final value 88.571758
converged
Fitting Repeat 3
# weights: 305
initial value 105.712628
iter 10 value 94.992970
iter 20 value 94.052548
iter 30 value 91.051425
iter 40 value 90.784015
iter 50 value 90.619641
iter 60 value 89.755852
iter 70 value 88.541709
iter 80 value 88.276595
iter 90 value 81.792187
iter 100 value 79.553061
final value 79.553061
stopped after 100 iterations
Fitting Repeat 4
# weights: 305
initial value 106.098261
iter 10 value 94.928169
iter 20 value 81.286483
iter 30 value 79.165719
iter 40 value 76.843588
iter 50 value 76.283045
iter 60 value 76.038274
iter 70 value 75.725776
iter 80 value 75.690695
iter 90 value 75.660748
iter 100 value 75.624377
final value 75.624377
stopped after 100 iterations
Fitting Repeat 5
# weights: 305
initial value 113.098150
iter 10 value 93.050364
iter 20 value 83.268068
iter 30 value 82.500991
iter 40 value 81.489294
iter 50 value 80.524900
iter 60 value 78.498029
iter 70 value 78.068222
iter 80 value 77.570510
iter 90 value 77.468093
iter 100 value 77.277266
final value 77.277266
stopped after 100 iterations
Fitting Repeat 1
# weights: 507
initial value 121.306357
iter 10 value 94.892340
iter 20 value 87.034204
iter 30 value 79.998727
iter 40 value 78.667542
iter 50 value 76.401028
iter 60 value 75.916486
iter 70 value 75.601780
iter 80 value 75.369712
iter 90 value 75.180261
iter 100 value 75.081178
final value 75.081178
stopped after 100 iterations
Fitting Repeat 2
# weights: 507
initial value 115.281750
iter 10 value 96.868487
iter 20 value 85.906864
iter 30 value 83.779869
iter 40 value 82.483835
iter 50 value 81.150689
iter 60 value 80.659794
iter 70 value 80.320307
iter 80 value 79.793089
iter 90 value 77.483619
iter 100 value 77.036722
final value 77.036722
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 104.349415
iter 10 value 94.059160
iter 20 value 93.278860
iter 30 value 91.926994
iter 40 value 91.706966
iter 50 value 91.347457
iter 60 value 91.146378
iter 70 value 86.744539
iter 80 value 82.420074
iter 90 value 78.789698
iter 100 value 76.942332
final value 76.942332
stopped after 100 iterations
Fitting Repeat 4
# weights: 507
initial value 107.325041
iter 10 value 94.025532
iter 20 value 88.151140
iter 30 value 81.628042
iter 40 value 79.431942
iter 50 value 78.878490
iter 60 value 78.656592
iter 70 value 78.436359
iter 80 value 78.306183
iter 90 value 78.154363
iter 100 value 77.770661
final value 77.770661
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 121.777041
iter 10 value 99.991514
iter 20 value 91.164177
iter 30 value 85.740968
iter 40 value 81.125932
iter 50 value 79.428294
iter 60 value 78.907973
iter 70 value 78.850813
iter 80 value 78.706496
iter 90 value 78.249842
iter 100 value 77.638192
final value 77.638192
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 97.424574
final value 94.054774
converged
Fitting Repeat 2
# weights: 103
initial value 98.759938
final value 94.010280
converged
Fitting Repeat 3
# weights: 103
initial value 96.667778
final value 94.054375
converged
Fitting Repeat 4
# weights: 103
initial value 94.414507
final value 94.054530
converged
Fitting Repeat 5
# weights: 103
initial value 108.603724
iter 10 value 94.082226
iter 20 value 94.077583
final value 94.052913
converged
Fitting Repeat 1
# weights: 305
initial value 105.644216
iter 10 value 94.057791
iter 20 value 94.029635
iter 30 value 89.381060
iter 40 value 89.004380
iter 50 value 88.995266
iter 60 value 88.988621
iter 70 value 88.988088
iter 70 value 88.988088
final value 88.988088
converged
Fitting Repeat 2
# weights: 305
initial value 105.370636
iter 10 value 93.989446
iter 20 value 93.985607
iter 30 value 92.862338
iter 40 value 90.658502
iter 40 value 90.658502
iter 40 value 90.658502
final value 90.658502
converged
Fitting Repeat 3
# weights: 305
initial value 105.466386
iter 10 value 94.058019
iter 20 value 94.052987
iter 30 value 92.496839
iter 40 value 83.990780
iter 50 value 83.889531
iter 60 value 83.888664
iter 70 value 83.886497
iter 80 value 83.885445
iter 90 value 83.885236
final value 83.884951
converged
Fitting Repeat 4
# weights: 305
initial value 98.151790
iter 10 value 94.057810
iter 20 value 93.732641
iter 30 value 89.456356
final value 89.454663
converged
Fitting Repeat 5
# weights: 305
initial value 96.785898
iter 10 value 94.013646
iter 20 value 94.009748
iter 30 value 91.711993
iter 40 value 91.656756
final value 91.656703
converged
Fitting Repeat 1
# weights: 507
initial value 97.936324
iter 10 value 94.060072
iter 20 value 94.041961
iter 30 value 93.532863
iter 40 value 81.419832
iter 50 value 81.314532
iter 60 value 81.313561
final value 81.313430
converged
Fitting Repeat 2
# weights: 507
initial value 102.380894
iter 10 value 94.061101
iter 20 value 81.843363
iter 30 value 81.606003
iter 40 value 77.484374
iter 50 value 77.458236
iter 60 value 77.304208
iter 70 value 76.554237
iter 80 value 76.467723
iter 90 value 76.439773
iter 100 value 76.347191
final value 76.347191
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 113.475228
iter 10 value 94.061690
iter 20 value 94.003676
iter 30 value 92.257451
iter 40 value 92.252674
iter 50 value 90.721203
iter 60 value 90.478557
iter 70 value 90.477590
iter 80 value 90.466204
iter 90 value 90.390988
final value 90.390630
converged
Fitting Repeat 4
# weights: 507
initial value 119.528707
iter 10 value 94.061853
iter 20 value 94.015176
iter 30 value 94.011127
iter 40 value 93.933179
iter 50 value 82.307392
iter 60 value 82.165326
iter 70 value 82.064944
iter 80 value 80.867801
iter 90 value 80.858352
iter 100 value 80.214401
final value 80.214401
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 97.639987
iter 10 value 93.219528
iter 20 value 93.216595
iter 30 value 90.414645
iter 40 value 87.578674
iter 50 value 87.315663
iter 60 value 84.636035
iter 70 value 84.590121
iter 80 value 83.487605
iter 90 value 78.453477
iter 100 value 78.345964
final value 78.345964
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 95.992312
final value 94.484211
converged
Fitting Repeat 2
# weights: 103
initial value 97.941917
final value 94.275362
converged
Fitting Repeat 3
# weights: 103
initial value 112.553930
final value 94.484211
converged
Fitting Repeat 4
# weights: 103
initial value 97.712384
final value 94.484211
converged
Fitting Repeat 5
# weights: 103
initial value 95.649266
final value 94.484211
converged
Fitting Repeat 1
# weights: 305
initial value 102.224021
final value 94.484211
converged
Fitting Repeat 2
# weights: 305
initial value 96.636621
final value 94.275362
converged
Fitting Repeat 3
# weights: 305
initial value 94.563362
final value 94.484211
converged
Fitting Repeat 4
# weights: 305
initial value 102.980942
iter 10 value 81.786715
iter 20 value 81.582194
iter 30 value 81.392884
iter 40 value 81.379346
final value 81.377468
converged
Fitting Repeat 5
# weights: 305
initial value 99.797847
final value 94.484211
converged
Fitting Repeat 1
# weights: 507
initial value 108.334400
final value 94.275362
converged
Fitting Repeat 2
# weights: 507
initial value 108.094945
final value 94.275363
converged
Fitting Repeat 3
# weights: 507
initial value 108.180895
iter 10 value 91.903864
iter 20 value 85.394034
final value 85.393874
converged
Fitting Repeat 4
# weights: 507
initial value 109.334289
iter 10 value 93.053542
iter 20 value 92.935006
iter 30 value 91.764228
iter 40 value 91.614909
final value 91.614716
converged
Fitting Repeat 5
# weights: 507
initial value 103.246526
iter 10 value 94.144736
iter 20 value 93.695232
iter 30 value 93.691074
final value 93.691059
converged
Fitting Repeat 1
# weights: 103
initial value 107.343265
iter 10 value 94.234691
iter 20 value 86.920171
iter 30 value 86.188561
iter 40 value 83.412303
iter 50 value 82.565038
iter 60 value 82.395260
iter 70 value 82.381699
final value 82.381424
converged
Fitting Repeat 2
# weights: 103
initial value 104.739939
iter 10 value 94.347706
iter 20 value 94.329913
iter 30 value 91.763813
iter 40 value 88.265998
iter 50 value 85.853657
iter 60 value 83.832642
iter 70 value 83.321065
iter 80 value 82.591692
iter 90 value 82.382719
final value 82.382481
converged
Fitting Repeat 3
# weights: 103
initial value 97.409546
iter 10 value 94.491847
iter 20 value 94.040151
iter 30 value 93.734597
iter 40 value 93.684126
iter 50 value 92.646724
iter 60 value 83.185873
iter 70 value 81.922674
iter 80 value 81.311302
iter 90 value 80.240479
iter 100 value 80.054603
final value 80.054603
stopped after 100 iterations
Fitting Repeat 4
# weights: 103
initial value 97.987027
iter 10 value 94.367367
iter 20 value 90.537615
iter 30 value 86.464845
iter 40 value 83.505379
iter 50 value 83.336062
iter 60 value 83.137287
iter 70 value 82.635369
iter 80 value 82.460716
iter 90 value 82.382796
final value 82.381424
converged
Fitting Repeat 5
# weights: 103
initial value 99.661920
iter 10 value 93.620703
iter 20 value 92.857635
iter 30 value 88.236906
iter 40 value 87.067106
iter 50 value 85.826086
iter 60 value 83.250047
iter 70 value 82.662294
iter 80 value 82.395883
final value 82.382524
converged
Fitting Repeat 1
# weights: 305
initial value 107.038562
iter 10 value 94.487407
iter 20 value 93.111353
iter 30 value 86.392376
iter 40 value 81.255805
iter 50 value 80.278273
iter 60 value 80.100960
iter 70 value 79.583202
iter 80 value 79.547035
iter 90 value 79.532182
iter 100 value 79.507274
final value 79.507274
stopped after 100 iterations
Fitting Repeat 2
# weights: 305
initial value 108.175087
iter 10 value 94.350316
iter 20 value 93.099778
iter 30 value 86.820596
iter 40 value 84.410735
iter 50 value 81.909339
iter 60 value 81.242806
iter 70 value 79.954998
iter 80 value 79.486945
iter 90 value 79.420893
iter 100 value 79.216307
final value 79.216307
stopped after 100 iterations
Fitting Repeat 3
# weights: 305
initial value 100.035988
iter 10 value 94.505003
iter 20 value 93.946617
iter 30 value 85.593584
iter 40 value 82.297854
iter 50 value 81.743196
iter 60 value 80.711006
iter 70 value 79.523310
iter 80 value 79.334857
iter 90 value 79.190370
iter 100 value 79.110472
final value 79.110472
stopped after 100 iterations
Fitting Repeat 4
# weights: 305
initial value 136.193111
iter 10 value 94.537199
iter 20 value 94.359642
iter 30 value 87.635231
iter 40 value 81.715053
iter 50 value 80.086472
iter 60 value 79.575463
iter 70 value 78.859438
iter 80 value 78.817546
iter 90 value 78.812053
iter 100 value 78.707601
final value 78.707601
stopped after 100 iterations
Fitting Repeat 5
# weights: 305
initial value 113.096783
iter 10 value 94.067085
iter 20 value 84.980485
iter 30 value 82.967070
iter 40 value 82.020667
iter 50 value 80.276146
iter 60 value 79.384052
iter 70 value 78.794990
iter 80 value 78.555644
iter 90 value 78.438836
iter 100 value 78.405944
final value 78.405944
stopped after 100 iterations
Fitting Repeat 1
# weights: 507
initial value 113.645102
iter 10 value 97.270931
iter 20 value 87.752670
iter 30 value 84.692125
iter 40 value 83.480730
iter 50 value 82.251988
iter 60 value 79.395717
iter 70 value 79.100285
iter 80 value 78.923169
iter 90 value 78.806641
iter 100 value 78.792361
final value 78.792361
stopped after 100 iterations
Fitting Repeat 2
# weights: 507
initial value 107.003542
iter 10 value 94.344470
iter 20 value 90.718581
iter 30 value 85.731339
iter 40 value 85.076613
iter 50 value 84.899410
iter 60 value 84.818978
iter 70 value 83.358290
iter 80 value 82.934821
iter 90 value 82.546938
iter 100 value 82.067735
final value 82.067735
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 116.889750
iter 10 value 93.298303
iter 20 value 92.270820
iter 30 value 84.759936
iter 40 value 82.398229
iter 50 value 81.793523
iter 60 value 81.262987
iter 70 value 80.633614
iter 80 value 79.197299
iter 90 value 78.953416
iter 100 value 78.943658
final value 78.943658
stopped after 100 iterations
Fitting Repeat 4
# weights: 507
initial value 107.738511
iter 10 value 93.739883
iter 20 value 91.807005
iter 30 value 85.617908
iter 40 value 84.526387
iter 50 value 82.956141
iter 60 value 81.020411
iter 70 value 80.028238
iter 80 value 79.508416
iter 90 value 79.381198
iter 100 value 79.366735
final value 79.366735
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 107.446663
iter 10 value 94.544864
iter 20 value 93.963342
iter 30 value 91.777526
iter 40 value 86.457173
iter 50 value 85.766193
iter 60 value 84.743410
iter 70 value 81.692379
iter 80 value 80.004664
iter 90 value 79.574052
iter 100 value 78.997183
final value 78.997183
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 94.743831
iter 10 value 88.842996
iter 20 value 84.372292
iter 30 value 84.370809
iter 40 value 82.138358
iter 50 value 81.638195
iter 60 value 81.629605
iter 70 value 81.580726
iter 80 value 81.548570
final value 81.548401
converged
Fitting Repeat 2
# weights: 103
initial value 102.525360
final value 94.277038
converged
Fitting Repeat 3
# weights: 103
initial value 96.965425
iter 10 value 94.485908
iter 20 value 94.484249
final value 94.484217
converged
Fitting Repeat 4
# weights: 103
initial value 96.337498
final value 94.485838
converged
Fitting Repeat 5
# weights: 103
initial value 97.817801
iter 10 value 94.485868
iter 20 value 94.484267
iter 30 value 93.863592
iter 40 value 93.542228
final value 93.542223
converged
Fitting Repeat 1
# weights: 305
initial value 98.062221
iter 10 value 94.489188
iter 20 value 94.484228
iter 30 value 93.519093
iter 40 value 93.181114
iter 50 value 86.299004
iter 60 value 85.574623
iter 70 value 85.560415
final value 85.560410
converged
Fitting Repeat 2
# weights: 305
initial value 114.542159
iter 10 value 94.281038
iter 20 value 94.279723
iter 30 value 90.546570
iter 40 value 84.183800
iter 50 value 83.840553
final value 83.840476
converged
Fitting Repeat 3
# weights: 305
initial value 101.742177
iter 10 value 94.180668
iter 20 value 94.110368
iter 30 value 94.107129
iter 40 value 84.423315
iter 50 value 84.365570
iter 60 value 84.351310
iter 70 value 84.311928
iter 80 value 83.817903
iter 90 value 81.479823
iter 100 value 80.587653
final value 80.587653
stopped after 100 iterations
Fitting Repeat 4
# weights: 305
initial value 110.397008
iter 10 value 94.489209
iter 20 value 94.282728
iter 30 value 88.596706
iter 40 value 84.380665
iter 50 value 84.373452
iter 60 value 84.302910
iter 70 value 81.565258
iter 80 value 81.474641
final value 81.474616
converged
Fitting Repeat 5
# weights: 305
initial value 112.506702
iter 10 value 94.488883
iter 20 value 94.244440
iter 30 value 85.432139
iter 40 value 83.158626
iter 50 value 80.605025
iter 60 value 79.998720
iter 70 value 79.258743
iter 80 value 78.385297
iter 90 value 77.259802
iter 100 value 77.212641
final value 77.212641
stopped after 100 iterations
Fitting Repeat 1
# weights: 507
initial value 101.955734
iter 10 value 92.332147
iter 20 value 92.026433
iter 30 value 91.200508
iter 40 value 91.199359
iter 50 value 84.906143
iter 60 value 84.594866
iter 70 value 81.312818
iter 80 value 78.912404
iter 90 value 78.683902
iter 100 value 78.024147
final value 78.024147
stopped after 100 iterations
Fitting Repeat 2
# weights: 507
initial value 104.952327
iter 10 value 94.283723
iter 20 value 94.109689
iter 30 value 89.047584
iter 40 value 83.894248
iter 50 value 83.850688
iter 60 value 83.831876
iter 60 value 83.831875
iter 60 value 83.831875
final value 83.831875
converged
Fitting Repeat 3
# weights: 507
initial value 96.885382
iter 10 value 93.566894
iter 20 value 93.530938
iter 30 value 88.038996
iter 40 value 86.268524
iter 50 value 86.267738
final value 86.267670
converged
Fitting Repeat 4
# weights: 507
initial value 98.270026
iter 10 value 94.283616
iter 20 value 93.420640
iter 30 value 88.406477
iter 40 value 88.392955
iter 50 value 88.391443
final value 88.390796
converged
Fitting Repeat 5
# weights: 507
initial value 98.083567
iter 10 value 94.492921
iter 20 value 94.444610
iter 30 value 81.634459
final value 81.633554
converged
Fitting Repeat 1
# weights: 103
initial value 95.915272
final value 94.052910
converged
Fitting Repeat 2
# weights: 103
initial value 101.237281
final value 94.032967
converged
Fitting Repeat 3
# weights: 103
initial value 96.529782
final value 94.052910
converged
Fitting Repeat 4
# weights: 103
initial value 94.135511
final value 94.052910
converged
Fitting Repeat 5
# weights: 103
initial value 96.101280
final value 94.052910
converged
Fitting Repeat 1
# weights: 305
initial value 107.523576
iter 10 value 93.856181
final value 93.855784
converged
Fitting Repeat 2
# weights: 305
initial value 96.636282
final value 94.052910
converged
Fitting Repeat 3
# weights: 305
initial value 97.367552
final value 94.052910
converged
Fitting Repeat 4
# weights: 305
initial value 102.023028
iter 10 value 93.008970
final value 93.008966
converged
Fitting Repeat 5
# weights: 305
initial value 113.845969
final value 94.052910
converged
Fitting Repeat 1
# weights: 507
initial value 94.221938
final value 94.052910
converged
Fitting Repeat 2
# weights: 507
initial value 99.894295
iter 10 value 92.748826
iter 20 value 86.013420
iter 30 value 84.997753
iter 40 value 84.770848
final value 84.768825
converged
Fitting Repeat 3
# weights: 507
initial value 97.897580
final value 94.032967
converged
Fitting Repeat 4
# weights: 507
initial value 101.731932
final value 94.052910
converged
Fitting Repeat 5
# weights: 507
initial value 106.246164
iter 10 value 90.680421
iter 20 value 85.583093
iter 30 value 84.713751
iter 40 value 83.902404
iter 50 value 83.718230
iter 60 value 82.320204
iter 70 value 81.802143
iter 80 value 81.053890
iter 90 value 80.778169
iter 100 value 80.720172
final value 80.720172
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 96.544569
iter 10 value 94.055887
iter 20 value 89.184321
iter 30 value 87.175357
iter 40 value 85.352100
iter 50 value 85.170796
iter 60 value 84.151517
iter 70 value 83.713039
iter 80 value 83.272422
iter 90 value 82.746692
iter 100 value 82.679888
final value 82.679888
stopped after 100 iterations
Fitting Repeat 2
# weights: 103
initial value 101.994582
iter 10 value 94.051685
iter 20 value 88.641568
iter 30 value 86.440551
iter 40 value 85.492547
iter 50 value 84.890727
iter 60 value 84.463492
final value 84.463377
converged
Fitting Repeat 3
# weights: 103
initial value 100.082730
iter 10 value 93.117675
iter 20 value 87.741781
iter 30 value 86.057628
iter 40 value 85.640514
iter 50 value 85.593775
final value 85.593619
converged
Fitting Repeat 4
# weights: 103
initial value 100.126580
iter 10 value 94.056149
iter 20 value 87.934931
iter 30 value 87.159390
iter 40 value 85.413295
iter 50 value 85.307812
iter 60 value 85.210266
iter 70 value 85.194116
final value 85.194067
converged
Fitting Repeat 5
# weights: 103
initial value 96.101593
iter 10 value 94.058305
iter 20 value 93.982031
iter 30 value 93.404334
iter 40 value 88.215860
iter 50 value 86.994194
iter 60 value 86.314374
iter 70 value 84.367918
iter 80 value 83.210426
iter 90 value 82.766235
iter 100 value 82.582467
final value 82.582467
stopped after 100 iterations
Fitting Repeat 1
# weights: 305
initial value 99.588967
iter 10 value 94.082609
iter 20 value 93.890229
iter 30 value 93.043853
iter 40 value 90.274894
iter 50 value 87.101490
iter 60 value 85.301068
iter 70 value 84.238870
iter 80 value 83.306975
iter 90 value 82.577618
iter 100 value 81.857058
final value 81.857058
stopped after 100 iterations
Fitting Repeat 2
# weights: 305
initial value 110.598240
iter 10 value 96.189965
iter 20 value 92.524587
iter 30 value 90.252644
iter 40 value 89.089560
iter 50 value 86.270405
iter 60 value 85.923435
iter 70 value 85.585012
iter 80 value 84.672859
iter 90 value 82.819829
iter 100 value 82.482044
final value 82.482044
stopped after 100 iterations
Fitting Repeat 3
# weights: 305
initial value 117.627073
iter 10 value 93.600892
iter 20 value 88.696425
iter 30 value 85.925940
iter 40 value 83.405918
iter 50 value 82.736805
iter 60 value 82.090239
iter 70 value 81.962479
iter 80 value 81.937191
iter 90 value 81.817616
iter 100 value 81.566527
final value 81.566527
stopped after 100 iterations
Fitting Repeat 4
# weights: 305
initial value 105.209468
iter 10 value 93.173604
iter 20 value 86.943726
iter 30 value 86.485218
iter 40 value 86.069593
iter 50 value 85.332502
iter 60 value 84.641274
iter 70 value 83.535422
iter 80 value 83.080984
iter 90 value 82.560767
iter 100 value 82.093989
final value 82.093989
stopped after 100 iterations
Fitting Repeat 5
# weights: 305
initial value 106.556388
iter 10 value 94.069021
iter 20 value 91.960175
iter 30 value 86.794488
iter 40 value 85.718244
iter 50 value 85.598674
iter 60 value 85.545436
iter 70 value 85.044560
iter 80 value 84.532362
iter 90 value 83.376147
iter 100 value 82.643302
final value 82.643302
stopped after 100 iterations
Fitting Repeat 1
# weights: 507
initial value 119.435207
iter 10 value 94.255118
iter 20 value 91.896195
iter 30 value 87.083337
iter 40 value 86.415375
iter 50 value 86.031509
iter 60 value 85.528287
iter 70 value 85.343305
iter 80 value 84.909185
iter 90 value 83.891001
iter 100 value 82.661303
final value 82.661303
stopped after 100 iterations
Fitting Repeat 2
# weights: 507
initial value 118.037356
iter 10 value 93.995052
iter 20 value 91.707468
iter 30 value 86.467049
iter 40 value 86.210136
iter 50 value 85.552988
iter 60 value 82.811301
iter 70 value 82.146399
iter 80 value 82.008083
iter 90 value 81.892948
iter 100 value 81.683588
final value 81.683588
stopped after 100 iterations
Fitting Repeat 3
# weights: 507
initial value 103.603045
iter 10 value 93.992929
iter 20 value 89.812607
iter 30 value 85.797663
iter 40 value 83.390816
iter 50 value 82.994558
iter 60 value 82.479268
iter 70 value 82.221703
iter 80 value 81.884092
iter 90 value 81.687318
iter 100 value 81.566125
final value 81.566125
stopped after 100 iterations
Fitting Repeat 4
# weights: 507
initial value 126.057573
iter 10 value 94.291019
iter 20 value 90.546477
iter 30 value 88.136305
iter 40 value 85.642593
iter 50 value 84.498437
iter 60 value 83.339429
iter 70 value 83.215150
iter 80 value 82.822323
iter 90 value 82.294088
iter 100 value 81.775107
final value 81.775107
stopped after 100 iterations
Fitting Repeat 5
# weights: 507
initial value 106.304310
iter 10 value 94.077838
iter 20 value 93.101509
iter 30 value 88.992876
iter 40 value 84.512008
iter 50 value 83.585376
iter 60 value 82.477830
iter 70 value 81.994653
iter 80 value 81.613037
iter 90 value 81.047766
iter 100 value 80.883109
final value 80.883109
stopped after 100 iterations
Fitting Repeat 1
# weights: 103
initial value 105.020357
final value 94.054680
converged
Fitting Repeat 2
# weights: 103
initial value 96.869312
final value 94.054613
converged
Fitting Repeat 3
# weights: 103
initial value 96.283055
final value 94.054556
converged
Fitting Repeat 4
# weights: 103
initial value 101.421218
iter 10 value 94.034917
iter 20 value 94.032361
iter 30 value 90.257308
iter 40 value 86.948421
final value 86.938454
converged
Fitting Repeat 5
# weights: 103
initial value 94.438013
final value 94.054870
converged
Fitting Repeat 1
# weights: 305
initial value 97.879645
iter 10 value 94.057697
iter 20 value 94.052997
iter 30 value 87.395788
iter 40 value 87.378004
iter 50 value 87.377189
iter 60 value 87.249762
iter 70 value 87.248680
iter 70 value 87.248680
final value 87.248680
converged
Fitting Repeat 2
# weights: 305
initial value 97.561259
iter 10 value 94.057699
iter 20 value 94.023087
iter 30 value 89.065464
iter 40 value 87.119045
iter 50 value 86.931389
iter 60 value 86.930345
iter 70 value 86.930308
iter 70 value 86.930308
iter 70 value 86.930308
final value 86.930308
converged
Fitting Repeat 3
# weights: 305
initial value 98.654342
iter 10 value 94.056843
iter 20 value 94.052908
iter 30 value 93.769688
iter 40 value 93.766238
iter 50 value 92.910757
iter 60 value 90.874139
iter 70 value 90.859700
iter 80 value 88.372396
iter 90 value 87.544089
iter 100 value 87.509102
final value 87.509102
stopped after 100 iterations
Fitting Repeat 4
# weights: 305
initial value 98.274494
iter 10 value 94.057586
iter 20 value 91.552735
iter 30 value 86.809311
iter 40 value 86.784642
iter 50 value 86.783318
final value 86.781628
converged
Fitting Repeat 5
# weights: 305
initial value 108.054619
iter 10 value 94.057738
iter 20 value 94.024664
iter 30 value 93.383295
final value 93.371986
converged
Fitting Repeat 1
# weights: 507
initial value 97.824087
iter 10 value 94.041272
iter 20 value 94.034466
final value 94.034083
converged
Fitting Repeat 2
# weights: 507
initial value 99.252485
iter 10 value 94.041330
iter 20 value 94.032552
iter 30 value 87.479140
iter 40 value 87.377278
iter 50 value 87.218161
iter 60 value 87.066513
iter 70 value 87.042218
iter 70 value 87.042218
iter 70 value 87.042218
final value 87.042218
converged
Fitting Repeat 3
# weights: 507
initial value 99.613791
iter 10 value 94.060063
iter 20 value 94.020603
iter 30 value 92.041400
iter 40 value 90.508148
iter 50 value 90.431836
iter 60 value 90.431079
iter 70 value 90.259793
iter 80 value 89.731184
iter 90 value 89.077036
iter 100 value 84.549665
final value 84.549665
stopped after 100 iterations
Fitting Repeat 4
# weights: 507
initial value 109.295644
iter 10 value 87.618905
iter 20 value 87.616425
iter 30 value 87.259920
iter 40 value 87.259439
iter 50 value 87.256994
iter 60 value 87.232772
final value 87.232582
converged
Fitting Repeat 5
# weights: 507
initial value 110.697138
iter 10 value 93.207282
iter 20 value 90.954945
iter 30 value 90.729492
iter 40 value 90.727587
iter 50 value 90.721321
iter 60 value 90.716076
iter 70 value 90.714643
iter 80 value 90.714541
iter 90 value 90.714401
iter 100 value 90.713065
final value 90.713065
stopped after 100 iterations
Fitting Repeat 1
# weights: 305
initial value 128.913221
iter 10 value 122.838249
iter 20 value 118.444788
iter 30 value 112.871781
iter 40 value 111.896981
iter 50 value 109.352753
iter 60 value 108.363050
iter 70 value 105.668210
iter 80 value 105.015793
iter 90 value 104.466541
iter 100 value 103.229909
final value 103.229909
stopped after 100 iterations
Fitting Repeat 2
# weights: 305
initial value 134.023610
iter 10 value 117.961111
iter 20 value 117.772695
iter 30 value 110.274748
iter 40 value 109.808670
iter 50 value 106.836114
iter 60 value 105.948349
iter 70 value 105.439870
iter 80 value 105.212146
iter 90 value 104.988340
iter 100 value 104.937333
final value 104.937333
stopped after 100 iterations
Fitting Repeat 3
# weights: 305
initial value 140.070119
iter 10 value 117.786477
iter 20 value 113.886030
iter 30 value 110.512080
iter 40 value 109.751493
iter 50 value 104.570209
iter 60 value 103.861541
iter 70 value 102.711026
iter 80 value 101.315311
iter 90 value 100.902068
iter 100 value 100.842487
final value 100.842487
stopped after 100 iterations
Fitting Repeat 4
# weights: 305
initial value 123.841837
iter 10 value 118.051263
iter 20 value 114.636914
iter 30 value 109.459812
iter 40 value 108.750509
iter 50 value 108.501026
iter 60 value 108.361308
iter 70 value 104.943987
iter 80 value 103.960291
iter 90 value 101.808046
iter 100 value 101.355854
final value 101.355854
stopped after 100 iterations
Fitting Repeat 5
# weights: 305
initial value 137.663242
iter 10 value 117.807336
iter 20 value 117.594623
iter 30 value 109.067876
iter 40 value 107.939425
iter 50 value 104.676817
iter 60 value 102.975415
iter 70 value 102.229714
iter 80 value 101.917442
iter 90 value 101.701760
iter 100 value 101.646323
final value 101.646323
stopped after 100 iterations
svmRadial
ranger
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls < cases
Setting levels: control = Positive, case = Negative
Setting direction: controls < cases
Setting levels: control = Positive, case = Negative
Setting direction: controls < cases
Setting levels: control = Positive, case = Negative
Setting direction: controls < cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls < cases
Setting levels: control = Positive, case = Negative
Setting direction: controls < cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls < cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
Setting levels: control = Positive, case = Negative
Setting direction: controls > cases
RUNIT TEST PROTOCOL -- Tue Jun 6 00:16:15 2023
***********************************************
Number of test functions: 7
Number of errors: 0
Number of failures: 0
1 Test Suite :
HPiP RUnit Tests - 7 test functions, 0 errors, 0 failures
Number of test functions: 7
Number of errors: 0
Number of failures: 0
Warning messages:
1: `repeats` has no meaning for this resampling method.
2: executing %dopar% sequentially: no parallel backend registered
>
>
>
>
> proc.time()
user system elapsed
54.131 1.516 68.765
HPiP.Rcheck/HPiP-Ex.timings
| name | user | system | elapsed | |
| FSmethod | 37.730 | 0.455 | 38.248 | |
| FreqInteractors | 0.301 | 0.000 | 0.303 | |
| calculateAAC | 0.040 | 0.004 | 0.043 | |
| calculateAutocor | 0.712 | 0.020 | 0.734 | |
| calculateCTDC | 0.106 | 0.000 | 0.106 | |
| calculateCTDD | 0.835 | 0.004 | 0.840 | |
| calculateCTDT | 0.271 | 0.016 | 0.287 | |
| calculateCTriad | 0.436 | 0.012 | 0.449 | |
| calculateDC | 0.128 | 0.004 | 0.132 | |
| calculateF | 0.429 | 0.000 | 0.430 | |
| calculateKSAAP | 0.140 | 0.004 | 0.144 | |
| calculateQD_Sm | 2.307 | 0.048 | 2.360 | |
| calculateTC | 2.403 | 0.040 | 2.447 | |
| calculateTC_Sm | 0.314 | 0.000 | 0.314 | |
| corr_plot | 38.268 | 0.415 | 38.748 | |
| enrichfindP | 0.426 | 0.012 | 15.856 | |
| enrichfind_hp | 0.051 | 0.000 | 1.144 | |
| enrichplot | 0.358 | 0.016 | 0.374 | |
| filter_missing_values | 0.002 | 0.000 | 0.001 | |
| getFASTA | 0.074 | 0.008 | 7.451 | |
| getHPI | 0 | 0 | 0 | |
| get_negativePPI | 0.002 | 0.000 | 0.002 | |
| get_positivePPI | 0 | 0 | 0 | |
| impute_missing_data | 0.001 | 0.000 | 0.001 | |
| plotPPI | 0.076 | 0.000 | 0.076 | |
| pred_ensembel | 18.076 | 0.294 | 16.057 | |
| var_imp | 39.933 | 0.717 | 40.755 | |