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This page was generated on 2023-06-06 11:00:30 -0000 (Tue, 06 Jun 2023).

HostnameOSArch (*)R versionInstalled pkgs
kunpeng2Linux (openEuler 22.03 LTS-SP1)aarch644.3.0 (2023-04-21) -- "Already Tomorrow" 4366
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BUILD results for DEqMS on kunpeng2


To the developers/maintainers of the DEqMS package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/DEqMS.git to reflect on this report. See Troubleshooting Build Report for more information.

- Use the following Renviron settings to reproduce errors and warnings.

Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details.

raw results

Package 527/2199HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DEqMS 1.19.0  (landing page)
Yafeng Zhu
Snapshot Date: 2023-06-05 06:35:06 -0000 (Mon, 05 Jun 2023)
git_url: https://git.bioconductor.org/packages/DEqMS
git_branch: devel
git_last_commit: 4afbdf1
git_last_commit_date: 2023-04-25 15:04:18 -0000 (Tue, 25 Apr 2023)
kunpeng2Linux (openEuler 22.03 LTS-SP1) / aarch64  OK    ERROR  skipped

Summary

Package: DEqMS
Version: 1.19.0
Command: /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data DEqMS
StartedAt: 2023-06-05 10:58:27 -0000 (Mon, 05 Jun 2023)
EndedAt: 2023-06-05 11:12:00 -0000 (Mon, 05 Jun 2023)
EllapsedTime: 813.2 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data DEqMS
###
##############################################################################
##############################################################################


* checking for file ‘DEqMS/DESCRIPTION’ ... OK
* preparing ‘DEqMS’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘DEqMS-package-vignette.Rmd’ using rmarkdown
trying URL 'https://ftp.ebi.ac.uk/pride-archive/2016/06/PXD004163/Yan_miR_Protein_table.flatprottable.txt'
Content type 'text/plain; charset=UTF-8' length 3515045 bytes (3.4 MB)
==================================================
downloaded 3.4 MB

trying URL 'https://ftp.ebi.ac.uk/pride-archive/2014/09/PXD000279/proteomebenchmark.zip'
Content type 'application/zip' length 38428469 bytes (36.6 MB)
=====
downloaded 4.2 MB


Quitting from lines 227-230 [DownloadLabelfreeData] (DEqMS-package-vignette.Rmd)
Error: processing vignette 'DEqMS-package-vignette.Rmd' failed with diagnostics:
download from 'https://ftp.ebi.ac.uk/pride-archive/2014/09/PXD000279/proteomebenchmark.zip' failed
--- failed re-building ‘DEqMS-package-vignette.Rmd’

SUMMARY: processing the following file failed:
  ‘DEqMS-package-vignette.Rmd’

Error: Vignette re-building failed.
Execution halted