| Back to Build/check report for BioC 3.18: simplified long |
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This page was generated on 2023-06-06 11:00:27 -0000 (Tue, 06 Jun 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) | aarch64 | 4.3.0 (2023-04-21) -- "Already Tomorrow" | 4366 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the BSgenome package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BSgenome.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. Note: If "R CMD check" recently failed on the Linux builder over a missing dependency, add the missing dependency to "Suggests" in your DESCRIPTION file. See the Renviron.bioc for details. |
| Package 237/2199 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| BSgenome 1.69.0 (landing page) Hervé Pagès
| kunpeng2 | Linux (openEuler 22.03 LTS-SP1) / aarch64 | OK | OK | WARNINGS | |||||||||
| Package: BSgenome |
| Version: 1.69.0 |
| Command: /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data BSgenome |
| StartedAt: 2023-06-05 10:01:48 -0000 (Mon, 05 Jun 2023) |
| EndedAt: 2023-06-05 10:03:59 -0000 (Mon, 05 Jun 2023) |
| EllapsedTime: 131.2 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: BSgenome_1.69.0.tar.gz |
| PackageFileSize: 5.998 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/R/R-4.3.0/bin/R CMD build --keep-empty-dirs --no-resave-data BSgenome ### ############################################################################## ############################################################################## * checking for file ‘BSgenome/DESCRIPTION’ ... OK * preparing ‘BSgenome’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... OK * checking for LF line-endings in source and make files and shell scripts * checking for empty or unneeded directories WARNING: directory ‘BSgenome/inst/pkgtemplates/BSgenome_datapkg/inst/extdata’ is empty WARNING: directory ‘BSgenome/inst/pkgtemplates/MaskedBSgenome_datapkg/inst/extdata’ is empty * building ‘BSgenome_1.69.0.tar.gz’ Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L, : storing paths of more than 100 bytes is not portable: ‘BSgenome/inst/extdata/GentlemanLab/BSgenome.Gmellonella.NCBI.ASM364042v2-tools/fasta_to_sorted_2bit.R’